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  5. Glyma.02G067400

Glyma.02G067400


Description : ribosomal protein S27


Gene families : OG_42_0001909 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001909_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.02G067400
Cluster HCCA clusters: Cluster_334

Target Alias Description ECC score Gene Family Method Actions
A4A49_15619 No alias 40s ribosomal protein s27-2 0.04 Orthogroups_2024-Update
At2g45710 No alias 40S ribosomal protein S27-1... 0.04 Orthogroups_2024-Update
At5g47930 No alias 40S ribosomal protein S27-3... 0.03 Orthogroups_2024-Update
Bradi3g43475 No alias ribosomal protein S27 0.03 Orthogroups_2024-Update
Brara.G01908.1 No alias component *(eS27) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Brara.I00365.1 No alias component *(eS27) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Cre12.g529400 No alias ribosomal protein S27 0.02 Orthogroups_2024-Update
LOC_Os04g27860 No alias 40S ribosomal protein S27, putative, expressed 0.03 Orthogroups_2024-Update
MA_87055g0010 No alias (at3g61110 : 146.0) Arabidopsis ribosomal protein;... 0.03 Orthogroups_2024-Update
Pp1s165_39V6 No alias 40s ribosomal protein 0.02 Orthogroups_2024-Update
Seita.1G160500.1 No alias component *(eS27) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Sobic.004G145801.1 No alias component *(eS27) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Solyc01g008090 No alias 40S ribosomal protein S27 (AHRD V3.3 *-* M0TJU4_MUSAM) 0.03 Orthogroups_2024-Update
evm.model.tig00001299.2 No alias (at5g47930 : 145.0) Zinc-binding ribosomal protein... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004129 cytochrome-c oxidase activity IEP Predicted GO
CC GO:0005740 mitochondrial envelope IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007029 endoplasmic reticulum organization IEP Predicted GO
BP GO:0007033 vacuole organization IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0015002 heme-copper terminal oxidase activity IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Predicted GO
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
CC GO:0031967 organelle envelope IEP Predicted GO
CC GO:0031975 envelope IEP Predicted GO
BP GO:0042255 ribosome assembly IEP Predicted GO
BP GO:0042256 mature ribosome assembly IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
BP GO:1905037 autophagosome organization IEP Predicted GO
InterPro domains Description Start Stop
IPR000592 Ribosomal_S27e 30 84
No external refs found!