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  5. Glyma.02G084500

Glyma.02G084500


Description : Ran BP2/NZF zinc finger-like superfamily protein


Gene families : OG_42_0001998 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001998_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.02G084500
Cluster HCCA clusters: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
Bradi1g11210 No alias Ran BP2/NZF zinc finger-like superfamily protein 0.04 Orthogroups_2024-Update
Bradi1g11397 No alias Ran BP2/NZF zinc finger-like superfamily protein 0.04 Orthogroups_2024-Update
Brara.F00420.1 No alias RNA editing factor *(OZ) 0.04 Orthogroups_2024-Update
GRMZM2G080139 No alias zinc finger (Ran-binding) family protein 0.02 Orthogroups_2024-Update
MA_10434973g0010 No alias (at1g55040 : 303.0) zinc finger (Ran-binding) family... 0.03 Orthogroups_2024-Update
Seita.9G121200.1 No alias RNA editing factor *(OZ) 0.04 Orthogroups_2024-Update
Sobic.001G116800.1 No alias RNA editing factor *(OZ) 0.03 Orthogroups_2024-Update
Solyc08g014510 No alias Zinc finger protein (AHRD V3.3 *** W9RXF5_9ROSA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001876 Znf_RanBP2 273 298
IPR001876 Znf_RanBP2 352 374
IPR001876 Znf_RanBP2 317 341
No external refs found!