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  5. Glyma.02G093500

Glyma.02G093500


Description : phospholipase D beta 1


Gene families : OG_42_0000199 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000199_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.02G093500
Cluster HCCA clusters: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
82084 No alias phospholipase D alpha 2 0.03 Orthogroups_2024-Update
Bradi2g34290 No alias phospholipase D alpha 1 0.02 Orthogroups_2024-Update
Glyma.04G067100 No alias phospholipase D alpha 2 0.03 Orthogroups_2024-Update
Glyma.18G288600 No alias phospholipase D beta 1 0.05 Orthogroups_2024-Update
evm.model.contig_4459.4 No alias (at1g52570 : 322.0) member of C2-PLD subfamily;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006476 protein deacetylation IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016575 histone deacetylation IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0035601 protein deacylation IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0098732 macromolecule deacylation IEP Predicted GO
InterPro domains Description Start Stop
IPR000008 C2_dom 292 418
IPR024632 PLipase_D_C 1026 1096
IPR001736 PLipase_D/transphosphatidylase 618 652
IPR001736 PLipase_D/transphosphatidylase 953 979
No external refs found!