Glyma.02G099500

Description : AP2/B3 transcription factor family protein

Gene families : OG_42_0000305 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000305_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.02G099500
Cluster	HCCA clusters: Cluster_79

Target	Alias	Description	ECC score	Gene Family Method
A4A49_27413	No alias	ap2erf and b3 domain-containing transcription factor rav1	0.03	Orthogroups_2024-Update
At1g13260	No alias	AP2/ERF and B3 domain-containing transcription factor...	0.03	Orthogroups_2024-Update
At1g68840	No alias	TEM2 [Source:UniProtKB/TrEMBL;Acc:A0A178WNP0]	0.05	Orthogroups_2024-Update
At3g11580	No alias	AP2/B3-like transcriptional factor family protein...	0.03	Orthogroups_2024-Update
Bradi3g32140	No alias	AP2/B3-like transcriptional factor family protein	0.03	Orthogroups_2024-Update
Brara.C03374.1	No alias	RAV/NGATHA-type transcription factor	0.03	Orthogroups_2024-Update
Brara.E00098.1	No alias	RAV/NGATHA-type transcription factor	0.04	Orthogroups_2024-Update
Brara.E00866.1	No alias	RAV/NGATHA-type transcription factor	0.03	Orthogroups_2024-Update
Brara.F00801.1	No alias	RAV/NGATHA-type transcription factor & AP2-RAV-type...	0.03	Orthogroups_2024-Update
Brara.H03121.1	No alias	RAV/NGATHA-type transcription factor	0.05	Orthogroups_2024-Update
Brara.I05049.1	No alias	RAV/NGATHA-type transcription factor & AP2-RAV-type...	0.03	Orthogroups_2024-Update
GRMZM2G082227	No alias	AP2/B3-like transcriptional factor family protein	0.04	Orthogroups_2024-Update
GRMZM2G169654	No alias	related to ABI3/VP1 2	0.03	Orthogroups_2024-Update
Glyma.07G048200	No alias	AP2/B3-like transcriptional factor family protein	0.03	Orthogroups_2024-Update
Glyma.19G196600	No alias	AP2/B3-like transcriptional factor family protein	0.03	Orthogroups_2024-Update
HORVU1Hr1G082670.6	No alias	RAV/NGATHA-type transcription factor & AP2-RAV-type...	0.05	Orthogroups_2024-Update
HORVU3Hr1G010100.2	No alias	RAV/NGATHA-type transcription factor & AP2-RAV-type...	0.02	Orthogroups_2024-Update
HORVU3Hr1G010190.5	No alias	RAV/NGATHA-type transcription factor & AP2-RAV-type...	0.04	Orthogroups_2024-Update
HORVU3Hr1G010200.1	No alias	RAV/NGATHA-type transcription factor	0.04	Orthogroups_2024-Update
HORVU3Hr1G010240.1	No alias	RAV/NGATHA-type transcription factor & AP2-RAV-type...	0.03	Orthogroups_2024-Update
HORVU3Hr1G064640.4	No alias	RAV/NGATHA-type transcription factor & AP2-RAV-type...	0.04	Orthogroups_2024-Update
LOC_Os01g49830	No alias	B3 DNA binding domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g47650	No alias	B3 DNA binding domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_10428163g0010	No alias	(at1g13260 : 267.0) Encodes an AP2/B3 domain...	0.03	Orthogroups_2024-Update
MA_10433425g0010	No alias	(at1g25560 : 91.3) Encodes a member of the RAV...	0.03	Orthogroups_2024-Update
MA_246350g0010	No alias	(at1g13260 : 168.0) Encodes an AP2/B3 domain...	0.05	Orthogroups_2024-Update
Mp2g22250.1	No alias	transcription factor (RAV/NGATHA). transcription factor (AP2-RAV)	0.02	Orthogroups_2024-Update
PSME_00021294-RA	No alias	(at1g13260 : 294.0) Encodes an AP2/B3 domain...	0.03	Orthogroups_2024-Update
PSME_00032471-RA	No alias	(at1g68840 : 300.0) Rav2 is part of a complex that has...	0.03	Orthogroups_2024-Update
PSME_00035556-RA	No alias	(at3g25730 : 293.0) ethylene response DNA binding factor...	0.06	Orthogroups_2024-Update
PSME_00048986-RA	No alias	(at1g25560 : 246.0) Encodes a member of the RAV...	0.03	Orthogroups_2024-Update
PSME_00057154-RA	No alias	(at1g13260 : 282.0) Encodes an AP2/B3 domain...	0.03	Orthogroups_2024-Update
Potri.006G208100	No alias	AP2/B3-like transcriptional factor family protein	0.06	Orthogroups_2024-Update
Potri.010G129200	No alias	AP2/B3 transcription factor family protein	0.05	Orthogroups_2024-Update
Seita.5G096900.1	No alias	RAV/NGATHA-type transcription factor & AP2-RAV-type...	0.03	Orthogroups_2024-Update
Seita.5G280700.1	No alias	RAV/NGATHA-type transcription factor & AP2-RAV-type...	0.03	Orthogroups_2024-Update
Seita.6G064600.1	No alias	RAV/NGATHA-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.003G265200.1	No alias	RAV/NGATHA-type transcription factor & AP2-RAV-type...	0.04	Orthogroups_2024-Update
Solyc04g007000	No alias	AP2/B3 transcription factor family protein (AHRD V3.3...	0.06	Orthogroups_2024-Update
Sopen04g002090	No alias	B3 DNA binding domain	0.06	Orthogroups_2024-Update
Sopen05g005620	No alias	B3 DNA binding domain	0.04	Orthogroups_2024-Update
Sopen10g032690	No alias	B3 DNA binding domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Predicted GO
BP	GO:0000272	polysaccharide catabolic process	IEP	Predicted GO
CC	GO:0000786	nucleosome	IEP	Predicted GO
MF	GO:0004673	protein histidine kinase activity	IEP	Predicted GO
MF	GO:0004806	triglyceride lipase activity	IEP	Predicted GO
BP	GO:0006325	chromatin organization	IEP	Predicted GO
BP	GO:0006334	nucleosome assembly	IEP	Predicted GO
MF	GO:0016160	amylase activity	IEP	Predicted GO
MF	GO:0016161	beta-amylase activity	IEP	Predicted GO
MF	GO:0016298	lipase activity	IEP	Predicted GO
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Predicted GO
BP	GO:0022607	cellular component assembly	IEP	Predicted GO
MF	GO:0030246	carbohydrate binding	IEP	Predicted GO
CC	GO:0032993	protein-DNA complex	IEP	Predicted GO
MF	GO:0033926	glycopeptide alpha-N-acetylgalactosaminidase activity	IEP	Predicted GO
BP	GO:0034622	cellular protein-containing complex assembly	IEP	Predicted GO
BP	GO:0034728	nucleosome organization	IEP	Predicted GO
BP	GO:0043933	protein-containing complex subunit organization	IEP	Predicted GO
CC	GO:0044427	chromosomal part	IEP	Predicted GO
CC	GO:0044815	DNA packaging complex	IEP	Predicted GO
BP	GO:0065003	protein-containing complex assembly	IEP	Predicted GO
BP	GO:0065004	protein-DNA complex assembly	IEP	Predicted GO
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Predicted GO
MF	GO:0140103	catalytic activity, acting on a glycoprotein	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003340	B3_DNA-bd	210	325
IPR001471	AP2/ERF_dom	81	129

External Links

No external refs found!

Glyma.02G099500

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation