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  5. Glyma.02G103300

Glyma.02G103300


Description : RING/U-box superfamily protein


Gene families : OG_42_0000181 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000181_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.02G103300
Cluster HCCA clusters: Cluster_514

Target Alias Description ECC score Gene Family Method Actions
A4A49_16231 No alias e3 ubiquitin-protein ligase mbr1 0.02 Orthogroups_2024-Update
A4A49_32086 No alias putative e3 ubiquitin-protein ligase rhg1a 0.03 Orthogroups_2024-Update
At3g15070 No alias AT3g15070/K15M2_22 [Source:UniProtKB/TrEMBL;Acc:Q94F54] 0.03 Orthogroups_2024-Update
At4g31450 No alias AT4g31450/F3L17_20 [Source:UniProtKB/TrEMBL;Acc:Q944Q9] 0.03 Orthogroups_2024-Update
Bradi2g34660 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Brara.G02303.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
GRMZM2G122223 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G180000 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G024190.2 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU3Hr1G061010.9 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Kfl00027_0540 kfl00027_0540_v1.1 (at5g24870 : 106.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
LOC_Os05g48970 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g48040 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
Potri.001G373700 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.010G220700 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Sobic.004G042100.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Solyc08g006460 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT5G10650.2) 0.03 Orthogroups_2024-Update
Solyc12g088740 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT5G42940.2) 0.03 Orthogroups_2024-Update
Sopen12g030650 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen12g032260 No alias Ring finger domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004594 pantothenate kinase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005047 signal recognition particle binding IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
CC GO:0005785 signal recognition particle receptor complex IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0015937 coenzyme A biosynthetic process IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 682 723
No external refs found!