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  5. Glyma.02G108300

Glyma.02G108300


Description : RING/U-box superfamily protein


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.02G108300
Cluster HCCA clusters: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
A4A49_11116 No alias putative e3 ubiquitin-protein ligase rhc1a 0.02 Orthogroups_2024-Update
A4A49_15281 No alias putative e3 ubiquitin-protein ligase rhc1a 0.02 Orthogroups_2024-Update
A4A49_21563 No alias e3 ubiquitin-protein ligase ring1 0.03 Orthogroups_2024-Update
A4A49_41691 No alias e3 ubiquitin-protein ligase sdir1 0.02 Orthogroups_2024-Update
At3g02340 No alias At3g02340 [Source:UniProtKB/TrEMBL;Acc:Q9FWA5] 0.02 Orthogroups_2024-Update
GRMZM2G122848 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
GRMZM2G157855 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G168690 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G050800 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.17G108900 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Glyma.18G218200 No alias RING/U-box superfamily protein 0.05 Orthogroups_2024-Update
HORVU5Hr1G046250.24 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.06 Orthogroups_2024-Update
HORVU6Hr1G034800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G092570.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os06g01200 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.01 Orthogroups_2024-Update
LOC_Os06g42700 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.01 Orthogroups_2024-Update
LOC_Os07g43740 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g37230 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.01 Orthogroups_2024-Update
MA_10267109g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_126084g0010 No alias (at3g56580 : 137.0) RING/U-box superfamily protein;... 0.05 Orthogroups_2024-Update
Mp7g04520.1 No alias no hits & (original description: none) 0.01 Orthogroups_2024-Update
PSME_00021656-RA No alias (at3g46620 : 181.0) zinc finger (C3HC4-type RING finger)... 0.05 Orthogroups_2024-Update
Potri.002G083001 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.01 Orthogroups_2024-Update
Potri.003G145800 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Seita.7G317900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.8G172700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g009000 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT3G56580.3) 0.02 Orthogroups_2024-Update
Solyc05g007900 No alias LOW QUALITY:RING/U-box superfamily protein, putative... 0.01 Orthogroups_2024-Update
Solyc05g018050 No alias LOW QUALITY:RING/U-box superfamily protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc08g075910 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT3G56580.3) 0.02 Orthogroups_2024-Update
Sopen05g014750 No alias Ring finger domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 190 232
No external refs found!