Glyma.02G112100

Description : WRKY DNA-binding protein 3

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.02G112100
Cluster	HCCA clusters: Cluster_311

Target	Alias	Description	ECC score	Gene Family Method
At3g56400	No alias	Probable WRKY transcription factor 70...	0.03	Orthogroups_2024-Update
Bradi2g33540	No alias	WRKY DNA-binding protein 50	0.02	Orthogroups_2024-Update
Brara.C02090.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.C02724.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.D00225.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Brara.D01806.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.H01150.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.K00459.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G013391	No alias	WRKY DNA-binding protein 65	0.03	Orthogroups_2024-Update
GRMZM2G015433	No alias	WRKY DNA-binding protein 56	0.03	Orthogroups_2024-Update
Glyma.03G256700	No alias	WRKY DNA-binding protein 30	0.04	Orthogroups_2024-Update
Glyma.07G262700	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Glyma.10G138300	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Glyma.16G176700	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Glyma.18G092200	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
HORVU1Hr1G070250.2	No alias	transcription factor *(WRKY33) & WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU3Hr1G071750.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU7Hr1G113850.4	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
LOC_Os07g02060	No alias	WRKY29, expressed	0.03	Orthogroups_2024-Update
PSME_00013774-RA	No alias	(at1g62300 : 180.0) Encodes a transcription factor...	0.03	Orthogroups_2024-Update
PSME_00032678-RA	No alias	(at1g13960 : 312.0) Encodes WRKY DNA-binding protein 4...	0.04	Orthogroups_2024-Update
PSME_00035158-RA	No alias	(at3g01970 : 114.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00035159-RA	No alias	(at1g29860 : 115.0) member of WRKY Transcription Factor;...	0.05	Orthogroups_2024-Update
PSME_00036209-RA	No alias	(at4g01720 : 157.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00039099-RA	No alias	(at3g01970 : 111.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00041150-RA	No alias	(at4g04450 : 119.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
Potri.002G221600	No alias	zinc-dependent activator protein-1	0.03	Orthogroups_2024-Update
Potri.003G169100	No alias	WRKY DNA-binding protein 75	0.03	Orthogroups_2024-Update
Potri.018G019800	No alias	WRKY DNA-binding protein 40	0.03	Orthogroups_2024-Update
Pp1s157_29V6	No alias	transcription factor WRKY23	0.03	Orthogroups_2024-Update
Pp1s35_336V6	No alias	wrky transcription	0.02	Orthogroups_2024-Update
Seita.3G355500.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.001G282400.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.002G008600.2	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Solyc01g095630	No alias	WRKY transcription factor 41	0.03	Orthogroups_2024-Update
Solyc02g032950	No alias	WRKY transcription factor 16	0.03	Orthogroups_2024-Update
Solyc05g055750	No alias	WRKY transcription factor 34	0.03	Orthogroups_2024-Update
Sopen02g033030	No alias	WRKY DNA -binding domain	0.06	Orthogroups_2024-Update
Sopen04g028240	No alias	WRKY DNA -binding domain	0.02	Orthogroups_2024-Update
Sopen08g004130	No alias	WRKY DNA -binding domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Predicted GO
MF	GO:0000166	nucleotide binding	IEP	Predicted GO
MF	GO:0003824	catalytic activity	IEP	Predicted GO
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Predicted GO
MF	GO:0004672	protein kinase activity	IEP	Predicted GO
MF	GO:0004673	protein histidine kinase activity	IEP	Predicted GO
MF	GO:0005524	ATP binding	IEP	Predicted GO
BP	GO:0006298	mismatch repair	IEP	Predicted GO
BP	GO:0006464	cellular protein modification process	IEP	Predicted GO
BP	GO:0006468	protein phosphorylation	IEP	Predicted GO
BP	GO:0006793	phosphorus metabolic process	IEP	Predicted GO
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006807	nitrogen compound metabolic process	IEP	Predicted GO
MF	GO:0008144	drug binding	IEP	Predicted GO
MF	GO:0008483	transaminase activity	IEP	Predicted GO
BP	GO:0016070	RNA metabolic process	IEP	Predicted GO
MF	GO:0016301	kinase activity	IEP	Predicted GO
BP	GO:0016310	phosphorylation	IEP	Predicted GO
MF	GO:0016740	transferase activity	IEP	Predicted GO
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Predicted GO
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Predicted GO
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Predicted GO
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Predicted GO
MF	GO:0016779	nucleotidyltransferase activity	IEP	Predicted GO
MF	GO:0017076	purine nucleotide binding	IEP	Predicted GO
MF	GO:0030554	adenyl nucleotide binding	IEP	Predicted GO
MF	GO:0030983	mismatched DNA binding	IEP	Predicted GO
MF	GO:0032553	ribonucleotide binding	IEP	Predicted GO
MF	GO:0032555	purine ribonucleotide binding	IEP	Predicted GO
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Predicted GO
MF	GO:0033926	glycopeptide alpha-N-acetylgalactosaminidase activity	IEP	Predicted GO
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predicted GO
MF	GO:0036094	small molecule binding	IEP	Predicted GO
BP	GO:0036211	protein modification process	IEP	Predicted GO
MF	GO:0043168	anion binding	IEP	Predicted GO
BP	GO:0043170	macromolecule metabolic process	IEP	Predicted GO
BP	GO:0043412	macromolecule modification	IEP	Predicted GO
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Predicted GO
MF	GO:0070001	aspartic-type peptidase activity	IEP	Predicted GO
BP	GO:0090304	nucleic acid metabolic process	IEP	Predicted GO
MF	GO:0097367	carbohydrate derivative binding	IEP	Predicted GO
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Predicted GO
MF	GO:0140103	catalytic activity, acting on a glycoprotein	IEP	Predicted GO
MF	GO:1901265	nucleoside phosphate binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	175	231
IPR003657	WRKY_dom	343	400

External Links

No external refs found!

Glyma.02G112100

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation