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  5. Glyma.02G124700

Glyma.02G124700


Description : senescence-related gene 1


Gene families : OG_42_0000290 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000290_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.02G124700
Cluster HCCA clusters: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
422093 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.03 Orthogroups_2024-Update
A4A49_33472 No alias protein srg1 0.02 Orthogroups_2024-Update
PSME_00049325-RA No alias (at3g21420 : 316.0) 2-oxoglutarate (2OG) and... 0.03 Orthogroups_2024-Update
Solyc02g071470 No alias Mov34/MPN/PAD-1 family protein (AHRD V3.3 --* AT3G06820.3) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003910 DNA ligase (ATP) activity IEP Predicted GO
MF GO:0004451 isocitrate lyase activity IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016833 oxo-acid-lyase activity IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR026992 DIOX_N 52 151
IPR005123 Oxoglu/Fe-dep_dioxygenase 207 305
No external refs found!