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  5. Glyma.02G124900

Glyma.02G124900


Description : senescence-related gene 1


Gene families : OG_42_0000290 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000290_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.02G124900
Cluster HCCA clusters: Cluster_539

Target Alias Description ECC score Gene Family Method Actions
Glyma.08G092800 No alias senescence-related gene 1 0.03 Orthogroups_2024-Update
Glyma.15G240600 No alias senescence-related gene 1 0.03 Orthogroups_2024-Update
Glyma.20G010900 No alias senescence-related gene 1 0.04 Orthogroups_2024-Update
LOC_Os09g18450 No alias flavonol synthase/flavanone 3-hydroxylase, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os09g18520 No alias oxidoreductase, 2OG-Fe oxygenase family protein,... 0.02 Orthogroups_2024-Update
MA_10435878g0010 No alias (at3g21420 : 144.0) 2-oxoglutarate (2OG) and... 0.03 Orthogroups_2024-Update
MA_428072g0010 No alias (at3g21420 : 292.0) 2-oxoglutarate (2OG) and... 0.03 Orthogroups_2024-Update
PSME_00011571-RA No alias (at3g21420 : 327.0) 2-oxoglutarate (2OG) and... 0.03 Orthogroups_2024-Update
Potri.001G382400 No alias senescence-related gene 1 0.03 Orthogroups_2024-Update
Potri.009G025900 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0009733 response to auxin IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR005123 Oxoglu/Fe-dep_dioxygenase 207 304
IPR026992 DIOX_N 52 147
No external refs found!