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  5. Glyma.02G135300

Glyma.02G135300


Description : RNA-binding protein


Gene families : OG_42_0001098 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001098_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.02G135300
Cluster HCCA clusters: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
A4A49_04532 No alias la-related protein 6b 0.03 Orthogroups_2024-Update
A4A49_35753 No alias la-related protein 6c 0.03 Orthogroups_2024-Update
Potri.007G144800 No alias RNA-binding protein 0.03 Orthogroups_2024-Update
Seita.J003800.1 No alias regulatory protein *(LARP6) of mRNA quality control 0.02 Orthogroups_2024-Update
Solyc01g108310 No alias LA-related protein 6 LA RNA-binding domain protein (AHRD... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006630 La_HTH 101 158
IPR000504 RRM_dom 194 262
IPR009818 Ataxin-2_C 25 41
No external refs found!