1. Home
  2. Species
  3. Glycine max
  4. Sequence
  5. Glyma.02G143200

Glyma.02G143200


Description : histone H2A 11


Gene families : OG_42_0000970 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000970_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.02G143200
Cluster HCCA clusters: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
At3g54560 No alias Histone H2A [Source:UniProtKB/TrEMBL;Acc:A0A178V944] 0.07 Orthogroups_2024-Update
Brara.D00458.1 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
Brara.I03717.1 No alias histone *(H2A) 0.03 Orthogroups_2024-Update
Cre13.g567700 No alias histone H2A protein 9 0.03 Orthogroups_2024-Update
Glyma.03G158100 No alias histone H2A 11 0.06 Orthogroups_2024-Update
Glyma.10G031200 No alias histone H2A 11 0.05 Orthogroups_2024-Update
HORVU1Hr1G035130.1 No alias histone *(H2A) 0.04 Orthogroups_2024-Update
PSME_00056014-RA No alias (q8s857|h2av2_orysa : 159.0) Probable histone H2A... 0.02 Orthogroups_2024-Update
Pp1s219_44V6 No alias histone 2 0.03 Orthogroups_2024-Update
Seita.9G531300.1 No alias histone *(H2A) 0.04 Orthogroups_2024-Update
Solyc06g084090 No alias Histone H2A (AHRD V3.3 *** K4CAR4_SOLLC) 0.05 Orthogroups_2024-Update
Sopen06g035480 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
evm.model.contig_2022.11 No alias (q84mp7|h2av3_orysa : 175.0) Probable histone H2A... 0.02 Orthogroups_2024-Update
evm.model.tig00021108.27 No alias (q8h7y8|h2av1_orysa : 197.0) Probable histone H2A... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
BP GO:0045132 meiotic chromosome segregation IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
BP GO:0098813 nuclear chromosome segregation IEP Predicted GO
BP GO:1903046 meiotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 15 105
IPR032454 Histone_H2A_C 106 135
No external refs found!