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  5. Glyma.02G159900

Glyma.02G159900


Description : pleiotropic drug resistance 11


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.02G159900
Cluster HCCA clusters: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
A4A49_10347 No alias pleiotropic drug resistance protein 1 0.04 Orthogroups_2024-Update
GRMZM2G143139 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
GRMZM2G415529 No alias pleiotropic drug resistance 6 0.03 Orthogroups_2024-Update
GRMZM2G451792 No alias pleiotropic drug resistance 7 0.03 Orthogroups_2024-Update
GRMZM2G477872 No alias pleiotropic drug resistance 11 0.02 Orthogroups_2024-Update
LOC_Os09g16458 No alias pleiotropic drug resistance protein 4, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00000647-RA No alias (at1g59870 : 1668.0) ATP binding cassette transporter.... 0.03 Orthogroups_2024-Update
PSME_00000867-RA No alias (q8gu92|pdr2_orysa : 1758.0) Probable pleiotropic drug... 0.02 Orthogroups_2024-Update
PSME_00001267-RA No alias (q5z9s8|pdr12_orysa : 1556.0) Pleiotropic drug... 0.04 Orthogroups_2024-Update
PSME_00001762-RA No alias (q5z9s8|pdr12_orysa : 1873.0) Pleiotropic drug... 0.02 Orthogroups_2024-Update
PSME_00013643-RA No alias (q76cu2|pdr1_tobac : 1408.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
Seita.5G221700.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Seita.9G187800.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Solyc06g065670 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004560 alpha-L-fucosidase activity IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0015928 fucosidase activity IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR029481 ABC_trans_N 111 161
IPR013525 ABC_2_trans 1204 1416
IPR013525 ABC_2_trans 523 735
IPR003439 ABC_transporter-like 187 369
IPR013581 PDR_assoc 748 806
IPR003439 ABC_transporter-like 907 1058
No external refs found!