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  5. Glyma.02G167100

Glyma.02G167100


Description : BED zinc finger ;hAT family dimerisation domain


Gene families : OG_42_0000225 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000225_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.02G167100
Cluster HCCA clusters: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
Glyma.06G032801 No alias BED zinc finger ;hAT family dimerisation domain 0.03 Orthogroups_2024-Update
Glyma.17G167500 No alias BED zinc finger ;hAT family dimerisation domain 0.03 Orthogroups_2024-Update
LOC_Os02g15510 No alias BED zinc finger family protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g25210 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g07810 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Solyc07g041710 No alias No description available 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
InterPro domains Description Start Stop
IPR008906 HATC_C_dom 475 555
IPR025525 hAT-like_transposase_RNase-H 346 419
No external refs found!