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  5. Glyma.02G172500

Glyma.02G172500


Description : hAT transposon superfamily


Gene families : OG_42_0000049 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000049_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.02G172500
Cluster HCCA clusters: Cluster_431

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G398024 No alias hAT dimerisation domain-containing protein 0.04 Orthogroups_2024-Update
Glyma.13G192700 No alias hAT transposon superfamily 0.03 Orthogroups_2024-Update
Glyma.14G109500 No alias hAT dimerisation domain-containing protein 0.03 Orthogroups_2024-Update
LOC_Os07g15420 No alias transposon protein, putative, Ac/Ds sub-class, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g17510 No alias transposon protein, putative, Ac/Ds sub-class, expressed 0.03 Orthogroups_2024-Update
MA_10332809g0010 No alias (at1g79740 : 151.0) hAT transposon superfamily;... 0.03 Orthogroups_2024-Update
PSME_00002788-RA No alias (at4g05160 : 161.0) Encodes a peroxisomal protein... 0.03 Orthogroups_2024-Update
PSME_00055084-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
InterPro domains Description Start Stop
IPR008906 HATC_C_dom 562 637
IPR007021 DUF659 197 345
No external refs found!