Glyma.02G196301

Description : plant U-box 24

Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.02G196301
Cluster	HCCA clusters: Cluster_538

Target	Alias	Description	ECC score	Gene Family Method
At1g49780	No alias	U-box domain-containing protein 26...	0.04	Orthogroups_2024-Update
At5g37490	No alias	U-box domain-containing protein 21...	0.02	Orthogroups_2024-Update
Bradi3g45250	No alias	CYS, MET, PRO, and GLY protein 2	0.03	Orthogroups_2024-Update
Bradi3g45380	No alias	plant U-box 25	0.02	Orthogroups_2024-Update
Glyma.02G242900	No alias	CYS, MET, PRO, and GLY protein 1	0.04	Orthogroups_2024-Update
Glyma.03G202600	No alias	plant U-box 22	0.03	Orthogroups_2024-Update
Glyma.07G106000	No alias	ARM repeat superfamily protein	0.04	Orthogroups_2024-Update
Glyma.12G189000	No alias	plant U-box 23	0.03	Orthogroups_2024-Update
Glyma.14G212200	No alias	CYS, MET, PRO, and GLY protein 1	0.05	Orthogroups_2024-Update
Glyma.18G042100	No alias	ARM repeat superfamily protein	0.04	Orthogroups_2024-Update
HORVU0Hr1G003810.1	No alias	E3 ubiquitin ligase	0.03	Orthogroups_2024-Update
LOC_Os01g64570	No alias	U-box domain-containing protein, putative, expressed	0.04	Orthogroups_2024-Update
LOC_Os04g35680	No alias	U-box domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os06g13870	No alias	U-box protein CMPG1, putative, expressed	0.03	Orthogroups_2024-Update
MA_410546g0010	No alias	(at2g35930 : 239.0) Encodes a cytoplasmically localized...	0.05	Orthogroups_2024-Update
MA_8030489g0010	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
PSME_00043995-RA	No alias	(at1g49780 : 227.0) plant U-box 26 (PUB26); FUNCTIONS...	0.03	Orthogroups_2024-Update
PSME_00054803-RA	No alias	(at3g52450 : 283.0) Encodes a cytoplasmically localized...	0.04	Orthogroups_2024-Update
PSME_00056652-RA	No alias	(at2g35930 : 195.0) Encodes a cytoplasmically localized...	0.03	Orthogroups_2024-Update
PSME_00056761-RA	No alias	(at3g19380 : 247.0) plant U-box 25 (PUB25); FUNCTIONS...	0.04	Orthogroups_2024-Update
Potri.009G016200	No alias	plant U-box 23	0.03	Orthogroups_2024-Update
Potri.014G101100	No alias	plant U-box 23	0.04	Orthogroups_2024-Update
Seita.4G109000.1	No alias	E3 ubiquitin ligase	0.04	Orthogroups_2024-Update
Solyc11g068940	No alias	U-box domain-containing family protein (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	InterProScan predictions
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
BP	GO:0007275	multicellular organism development	IEP	Predicted GO
BP	GO:0009790	embryo development	IEP	Predicted GO
BP	GO:0009793	embryo development ending in seed dormancy	IEP	Predicted GO
MF	GO:0010333	terpene synthase activity	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Predicted GO
MF	GO:0019825	oxygen binding	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
BP	GO:0032501	multicellular organismal process	IEP	Predicted GO
BP	GO:0032502	developmental process	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
BP	GO:0048856	anatomical structure development	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO
MF	GO:0071949	FAD binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	6	78

External Links

No external refs found!

Glyma.02G196301

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation