Glyma.02G200300

Description : Ribosomal S17 family protein

Gene families : OG_42_0002664 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002664_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.02G200300
Cluster	HCCA clusters: Cluster_271

Target	Alias	Description	ECC score	Gene Family Method
270936	No alias	Ribosomal S17 family protein	0.03	Orthogroups_2024-Update
At5g04800	No alias	40S ribosomal protein S17-4...	0.04	Orthogroups_2024-Update
Brara.B00154.1	No alias	component *(eS17) of small ribosomal-subunit (SSU) proteome	0.06	Orthogroups_2024-Update
Brara.C00178.1	No alias	component *(eS17) of small ribosomal-subunit (SSU) proteome	0.05	Orthogroups_2024-Update
Brara.J02711.1	No alias	component *(eS17) of small ribosomal-subunit (SSU) proteome	0.04	Orthogroups_2024-Update
Cre12.g498250	No alias	Ribosomal S17 family protein	0.02	Orthogroups_2024-Update
Glyma.07G219500	No alias	Ribosomal S17 family protein	0.05	Orthogroups_2024-Update
HORVU1Hr1G042220.1	No alias	component *(eS17) of small ribosomal-subunit (SSU) proteome	0.03	Orthogroups_2024-Update
MA_184894g0010	No alias	(at5g04800 : 212.0) Ribosomal S17 family protein;...	0.02	Orthogroups_2024-Update
Mp8g18950.1	No alias	component RPS17 of SSU proteome	0.08	Orthogroups_2024-Update
PSME_00034734-RA	No alias	(at5g04800 : 198.0) Ribosomal S17 family protein;...	0.02	Orthogroups_2024-Update
Pp1s76_75V6	No alias	40s ribosomal protein	0.04	Orthogroups_2024-Update
Seita.9G497100.1	No alias	component *(eS17) of small ribosomal-subunit (SSU) proteome	0.04	Orthogroups_2024-Update
Sobic.010G076400.1	No alias	component *(eS17) of small ribosomal-subunit (SSU) proteome	0.04	Orthogroups_2024-Update
Solyc05g055230	No alias	40S ribosomal protein S17 (AHRD V3.3 *** RS17_SOLLC)	0.03	Orthogroups_2024-Update
Solyc11g006690	No alias	40S ribosomal protein S17 (AHRD V3.3 *** RS17_SOLLC)	0.03	Orthogroups_2024-Update
Sopen05g033670	No alias	Ribosomal S17	0.06	Orthogroups_2024-Update
Sopen10g032640	No alias	Ribosomal S17	0.04	Orthogroups_2024-Update
Sopen11g002620	No alias	Ribosomal S17	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular	IEA	InterProScan predictions
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Predicted GO
MF	GO:0004616	phosphogluconate dehydrogenase (decarboxylating) activity	IEP	Predicted GO
MF	GO:0004751	ribose-5-phosphate isomerase activity	IEP	Predicted GO
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Predicted GO
BP	GO:0006098	pentose-phosphate shunt	IEP	Predicted GO
BP	GO:0006405	RNA export from nucleus	IEP	Predicted GO
BP	GO:0006406	mRNA export from nucleus	IEP	Predicted GO
BP	GO:0006739	NADP metabolic process	IEP	Predicted GO
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	Predicted GO
BP	GO:0006913	nucleocytoplasmic transport	IEP	Predicted GO
CC	GO:0008541	proteasome regulatory particle, lid subcomplex	IEP	Predicted GO
BP	GO:0009052	pentose-phosphate shunt, non-oxidative branch	IEP	Predicted GO
BP	GO:0009117	nucleotide metabolic process	IEP	Predicted GO
CC	GO:0009522	photosystem I	IEP	Predicted GO
BP	GO:0015931	nucleobase-containing compound transport	IEP	Predicted GO
BP	GO:0015985	energy coupled proton transport, down electrochemical gradient	IEP	Predicted GO
BP	GO:0015986	ATP synthesis coupled proton transport	IEP	Predicted GO
MF	GO:0016853	isomerase activity	IEP	Predicted GO
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Predicted GO
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	Predicted GO
BP	GO:0019637	organophosphate metabolic process	IEP	Predicted GO
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	Predicted GO
BP	GO:0019693	ribose phosphate metabolic process	IEP	Predicted GO
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	Predicted GO
BP	GO:0043248	proteasome assembly	IEP	Predicted GO
CC	GO:0044455	mitochondrial membrane part	IEP	Predicted GO
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Predicted GO
BP	GO:0050657	nucleic acid transport	IEP	Predicted GO
BP	GO:0050658	RNA transport	IEP	Predicted GO
BP	GO:0051028	mRNA transport	IEP	Predicted GO
BP	GO:0051156	glucose 6-phosphate metabolic process	IEP	Predicted GO
BP	GO:0051168	nuclear export	IEP	Predicted GO
BP	GO:0051169	nuclear transport	IEP	Predicted GO
BP	GO:0051236	establishment of RNA localization	IEP	Predicted GO
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	Predicted GO
CC	GO:0098796	membrane protein complex	IEP	Predicted GO
CC	GO:0098798	mitochondrial protein complex	IEP	Predicted GO
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	Predicted GO
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001210	Ribosomal_S17e	1	120

External Links

No external refs found!

Glyma.02G200300

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation