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  5. Glyma.02G227000

Glyma.02G227000


Description : zinc finger (CCCH-type) family protein


Gene families : OG_42_0006386 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006386_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.02G227000
Cluster HCCA clusters: Cluster_375

Target Alias Description ECC score Gene Family Method Actions
Potri.010G187900 No alias zinc finger (CCCH-type) family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 70 142
IPR000571 Znf_CCCH 271 291
No external refs found!