Glyma.02G240200


Description : PHYTOENE SYNTHASE


Gene families : OG_42_0001912 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001912_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.02G240200
Cluster HCCA clusters: Cluster_344

Target Alias Description ECC score Gene Family Method Actions
At5g17230 No alias PHYTOENE SYNTHASE [Source:UniProtKB/TrEMBL;Acc:F4KGX7] 0.04 Orthogroups_2024-Update
Bradi1g29590 No alias PHYTOENE SYNTHASE 0.02 Orthogroups_2024-Update
Bradi4g01100 No alias PHYTOENE SYNTHASE 0.03 Orthogroups_2024-Update
Cre02.g095092 No alias PHYTOENE SYNTHASE 0.02 Orthogroups_2024-Update
HORVU5Hr1G005740.2 No alias phytoene synthase *(PSY) & EC_2.5 transferase... 0.03 Orthogroups_2024-Update
LOC_Os06g51290 No alias phytoene synthase, chloroplast precursor, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os12g43130 No alias phytoene synthase, chloroplast precursor, putative, expressed 0.05 Orthogroups_2024-Update
Mp2g21100.1 No alias phytoene synthase (PSY) 0.02 Orthogroups_2024-Update
Potri.005G205800 No alias PHYTOENE SYNTHASE 0.03 Orthogroups_2024-Update
Pp1s196_120V6 No alias phytoene synthase 0.02 Orthogroups_2024-Update
Pp1s323_70V6 No alias phytoene synthase 0.08 Orthogroups_2024-Update
Seita.3G397800.1 No alias phytoene synthase *(PSY) & EC_2.5 transferase... 0.05 Orthogroups_2024-Update
Sobic.008G180800.1 No alias phytoene synthase *(PSY) & EC_2.5 transferase... 0.03 Orthogroups_2024-Update
Sobic.010G276400.2 No alias phytoene synthase *(PSY) & EC_2.5 transferase... 0.03 Orthogroups_2024-Update
Solyc03g031860 No alias Phytoene synthase 1 0.04 Orthogroups_2024-Update
Sopen02g025960 No alias Squalene/phytoene synthase 0.06 Orthogroups_2024-Update
evm.model.tig00001093.21 No alias (p49085|psy_maize : 308.0) Phytoene synthase,... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0004779 sulfate adenylyltransferase activity IEP Predicted GO
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!