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  5. Glyma.02G248500

Glyma.02G248500


Description : expansin A4


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.02G248500
Cluster HCCA clusters: Cluster_369

Target Alias Description ECC score Gene Family Method Actions
Brara.D00393.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Brara.J02891.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Glyma.05G025600 No alias expansin A1 0.03 Orthogroups_2024-Update
Glyma.15G037700 No alias expansin A4 0.03 Orthogroups_2024-Update
LOC_Os10g30340 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_792493g0010 No alias (at1g69530 : 351.0) Member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
PSME_00011355-RA No alias (at2g40610 : 387.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
PSME_00014026-RA No alias (at1g69530 : 221.0) Member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
PSME_00018428-RA No alias (q40636|expa2_orysa : 402.0) Expansin-A2 precursor... 0.03 Orthogroups_2024-Update
PSME_00018430-RA No alias (at2g40610 : 404.0) member of Alpha-Expansin Gene... 0.06 Orthogroups_2024-Update
PSME_00025835-RA No alias (at1g26770 : 394.0) Encodes an expansin. Naming... 0.04 Orthogroups_2024-Update
PSME_00025836-RA No alias (at2g40610 : 399.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
PSME_00029310-RA No alias (at1g26770 : 386.0) Encodes an expansin. Naming... 0.02 Orthogroups_2024-Update
PSME_00051759-RA No alias (at2g40610 : 368.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
PSME_00055878-RA No alias (at5g02260 : 159.0) member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
Potri.004G080200 No alias expansin A13 0.04 Orthogroups_2024-Update
Potri.006G108000 No alias expansin A8 0.03 Orthogroups_2024-Update
Sobic.004G238801.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Solyc03g115270 No alias Expansin (AHRD V3.3 *** Q76HY8_MALDO) 0.02 Orthogroups_2024-Update
Solyc06g051800 No alias expansin 1 0.03 Orthogroups_2024-Update
Sopen06g017810 No alias Rare lipoprotein A (RlpA)-like double-psi beta-barrel 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 164 241
IPR009009 RlpA-like_DPBB 66 153
No external refs found!