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  5. Glyma.02G299200

Glyma.02G299200


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.02G299200
Cluster HCCA clusters: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
81583 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G318299 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G422631 No alias pectinesterase 11 0.04 Orthogroups_2024-Update
PSME_00000917-RA No alias (at1g05310 : 405.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00045931-RA No alias (at5g47500 : 448.0) Pectin lyase-like superfamily... 0.04 Orthogroups_2024-Update
Sobic.001G252300.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 54 115
IPR000070 Pectinesterase_cat 154 378
No external refs found!