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  5. Glyma.03G040800

Glyma.03G040800


Description : Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain


Gene families : OG_42_0000452 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000452_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.03G040800
Cluster HCCA clusters: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
A4A49_35982 No alias ultraviolet-b receptor uvr8 0.03 Orthogroups_2024-Update
Bradi3g51950 No alias Regulator of chromosome condensation (RCC1) family with... 0.02 Orthogroups_2024-Update
GRMZM2G124371 No alias Regulator of chromosome condensation (RCC1) family with... 0.03 Orthogroups_2024-Update
Glyma.11G168801 No alias Regulator of chromosome condensation (RCC1) family with... 0.04 Orthogroups_2024-Update
Glyma.18G044000 No alias Regulator of chromosome condensation (RCC1) family with... 0.04 Orthogroups_2024-Update
Glyma.18G210400 No alias Regulator of chromosome condensation (RCC1) family protein 0.03 Orthogroups_2024-Update
PSME_00003947-RA No alias (at5g19420 : 205.0) Regulator of chromosome condensation... 0.03 Orthogroups_2024-Update
Pp1s51_210V6 No alias F7K24.170; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.5G285000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G269400.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen02g025890 No alias Regulator of chromosome condensation (RCC1) repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 313 361
IPR000408 Reg_chr_condens 367 414
IPR000408 Reg_chr_condens 199 248
IPR000408 Reg_chr_condens 264 310
IPR000408 Reg_chr_condens 147 195
IPR000408 Reg_chr_condens 93 141
IPR013591 Brevis_radix_dom 966 1019
No external refs found!