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  5. Glyma.03G052300

Glyma.03G052300


Description : APRATAXIN-like


Gene families : OG_42_0000531 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000531_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.03G052300
Cluster HCCA clusters: Cluster_555

Target Alias Description ECC score Gene Family Method Actions
Glyma.06G040800 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
LOC_Os01g38610 No alias helix-loop-helix DNA-binding domain containing protein, expressed 0.04 Orthogroups_2024-Update
MA_306658g0010 No alias (at5g01310 : 99.4) Encodes a protein that has... 0.03 Orthogroups_2024-Update
Potri.001G191800 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Sobic.003G191800.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 52 91
No external refs found!