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  5. Glyma.03G061802

Glyma.03G061802


Description : Carbohydrate-binding-like fold


Gene families : OG_42_0002318 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002318_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.03G061802
Cluster HCCA clusters: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Glyma.01G115000 No alias Carbohydrate-binding-like fold 0.04 Orthogroups_2024-Update
Glyma.03G062500 No alias Carbohydrate-binding-like fold 0.03 Orthogroups_2024-Update
Glyma.07G148000 No alias Carbohydrate-binding-like fold 0.03 Orthogroups_2024-Update
Seita.5G387500.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:2001070 starch binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002044 CBM_fam20 93 179
No external refs found!