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  5. Glyma.03G080400

Glyma.03G080400


Description : hAT transposon superfamily


Gene families : OG_42_0000049 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000049_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.03G080400
Cluster HCCA clusters: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
Glyma.12G152900 No alias hAT transposon superfamily 0.05 Orthogroups_2024-Update
Glyma.19G056600 No alias hAT transposon superfamily 0.04 Orthogroups_2024-Update
LOC_Os09g32380 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
MA_10354504g0010 No alias (at1g79740 : 155.0) hAT transposon superfamily;... 0.03 Orthogroups_2024-Update
MA_171023g0020 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_54200g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00016751-RA No alias (at1g79740 : 133.0) hAT transposon superfamily;... 0.04 Orthogroups_2024-Update
PSME_00022489-RA No alias (at5g33406 : 99.0) hAT dimerisation domain-containing... 0.02 Orthogroups_2024-Update
PSME_00033581-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00052149-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00055084-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00055841-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Solyc10g047710 No alias No description available 0.03 Orthogroups_2024-Update
Solyc12g027780 No alias No description available 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR008906 HATC_C_dom 719 794
IPR003656 Znf_BED 164 193
IPR007021 DUF659 354 502
No external refs found!