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  5. Glyma.03G080600

Glyma.03G080600


Description : Phototropic-responsive NPH3 family protein


Gene families : OG_42_0000067 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.03G080600
Cluster HCCA clusters: Cluster_295

Target Alias Description ECC score Gene Family Method Actions
231529 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
423964 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
A4A49_25271 No alias btbpoz domain-containing protein npy2 0.03 Orthogroups_2024-Update
A4A49_30200 No alias btbpoz domain-containing protein 0.03 Orthogroups_2024-Update
Bradi1g70761 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Bradi4g30480 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Brara.J00152.1 No alias substrate adaptor *(SETH6) of CUL3-BTB E3 ubiquitin... 0.03 Orthogroups_2024-Update
Brara.J02327.1 No alias substrate adaptor *(DOT3) of CUL3-based E3 ubiquitin... 0.03 Orthogroups_2024-Update
GRMZM2G301803 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.05G104900 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.05G105000 No alias Phototropic-responsive NPH3 family protein 0.09 Orthogroups_2024-Update
Glyma.11G061200 No alias Phototropic-responsive NPH3 family protein 0.05 Orthogroups_2024-Update
Glyma.16G143800 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
PSME_00001436-RA No alias (at1g03010 : 601.0) Phototropic-responsive NPH3 family... 0.02 Orthogroups_2024-Update
PSME_00019671-RA No alias (at5g64330 : 730.0) Involved in blue light response... 0.03 Orthogroups_2024-Update
Potri.007G033900 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Potri.010G046800 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
Pp1s113_212V6 No alias root phototropism 0.02 Orthogroups_2024-Update
Pp1s214_65V6 No alias root phototropism 0.03 Orthogroups_2024-Update
Pp1s5_81V6 No alias root phototropism 0.03 Orthogroups_2024-Update
Seita.6G074900.1 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 Orthogroups_2024-Update
Seita.7G303100.1 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase complex 0.04 Orthogroups_2024-Update
Sobic.008G145300.3 No alias substrate adaptor *(NPY) of CUL3-BTB E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Sopen05g008470 No alias NPH3 family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0016556 mRNA modification IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0080009 mRNA methylation IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 30 116
IPR027356 NPH3_dom 204 461
No external refs found!