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  5. Glyma.03G158100

Glyma.03G158100


Description : histone H2A 11


Gene families : OG_42_0000970 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000970_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Glycine release: Glyma.03G158100
Cluster HCCA clusters: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
At3g54560 No alias Histone H2A [Source:UniProtKB/TrEMBL;Acc:A0A178V944] 0.04 Orthogroups_2024-Update
Brara.A03119.1 No alias histone *(H2A) 0.02 Orthogroups_2024-Update
Brara.D00458.1 No alias histone *(H2A) 0.04 Orthogroups_2024-Update
Brara.I03717.1 No alias histone *(H2A) 0.04 Orthogroups_2024-Update
Cre13.g567700 No alias histone H2A protein 9 0.03 Orthogroups_2024-Update
Glyma.02G143200 No alias histone H2A 11 0.06 Orthogroups_2024-Update
Glyma.19G160400 No alias histone H2A 11 0.03 Orthogroups_2024-Update
LOC_Os10g28230 No alias Core histone H2A/H2B/H3/H4 domain containing protein,... 0.02 Orthogroups_2024-Update
Seita.9G531300.1 No alias histone *(H2A) 0.06 Orthogroups_2024-Update
Solyc06g084090 No alias Histone H2A (AHRD V3.3 *** K4CAR4_SOLLC) 0.03 Orthogroups_2024-Update
Sopen06g035480 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
evm.model.contig_2022.11 No alias (q84mp7|h2av3_orysa : 175.0) Probable histone H2A... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006098 pentose-phosphate shunt IEP Predicted GO
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0019362 pyridine nucleotide metabolic process IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
BP GO:0051156 glucose 6-phosphate metabolic process IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
BP GO:0072524 pyridine-containing compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 14 105
IPR032454 Histone_H2A_C 106 135
No external refs found!