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  5. Glyma.03G171400

Glyma.03G171400


Description : Histone superfamily protein


Gene families : OG_42_0000156 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.03G171400
Cluster HCCA clusters: Cluster_321

Target Alias Description ECC score Gene Family Method Actions
Cre06.g265050 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre06.g265200 No alias histone H4 0.02 Orthogroups_2024-Update
Cre06.g268400 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g271300 No alias histone H4 0.03 Orthogroups_2024-Update
Cre06.g274300 No alias histone H4 0.04 Orthogroups_2024-Update
Cre06.g274900 No alias histone H4 0.02 Orthogroups_2024-Update
Cre06.g275700 No alias histone H4 0.04 Orthogroups_2024-Update
Cre06.g276650 No alias histone H4 0.03 Orthogroups_2024-Update
Cre12.g505450 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre12.g506350 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre12.g506450 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre17.g708650 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g709100 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
HORVU1Hr1G073680.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
HORVU5Hr1G087830.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
HORVU6Hr1G011510.1 No alias histone *(H4) 0.05 Orthogroups_2024-Update
Mp5g22450.1 No alias histone (H4) 0.02 Orthogroups_2024-Update
PSME_00034343-RA No alias (at5g59970 : 162.0) Histone superfamily protein;... 0.04 Orthogroups_2024-Update
Seita.2G301400.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
Seita.6G125400.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Sobic.001G313200.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
Sobic.009G167500.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Solyc04g011390 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.02 Orthogroups_2024-Update
Solyc06g005430 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.02 Orthogroups_2024-Update
Solyc06g075830 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.02 Orthogroups_2024-Update
Solyc06g075850 No alias No description available 0.02 Orthogroups_2024-Update
Solyc06g075930 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.02 Orthogroups_2024-Update
Solyc06g075960 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.02 Orthogroups_2024-Update
Solyc11g066160 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.02 Orthogroups_2024-Update
Solyc11g072840 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.03 Orthogroups_2024-Update
Solyc11g072860 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.02 Orthogroups_2024-Update
Sopen04g005580 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen06g032260 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen06g032380 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen11g030530 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 36 96
No external refs found!