Glyma.03G177400


Description : Ribosomal protein L4/L1 family


Gene families : OG_42_0001916 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001916_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.03G177400
Cluster HCCA clusters: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
166994 No alias Ribosomal protein L4/L1 family 0.04 Orthogroups_2024-Update
Bradi1g05510 No alias Ribosomal protein L4/L1 family 0.06 Orthogroups_2024-Update
Bradi1g55510 No alias Ribosomal protein L4/L1 family 0.06 Orthogroups_2024-Update
Brara.A03522.1 No alias component *(uL4) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Brara.C00088.1 No alias component *(uL4) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Brara.E03076.1 No alias component *(uL4) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Brara.J02849.1 No alias component *(uL4) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Cre09.g397697 No alias Ribosomal protein L4/L1 family 0.02 Orthogroups_2024-Update
GRMZM2G007695 No alias Ribosomal protein L4/L1 family 0.05 Orthogroups_2024-Update
GRMZM2G100403 No alias Ribosomal protein L4/L1 family 0.04 Orthogroups_2024-Update
Glyma.13G136400 No alias Ribosomal protein L4/L1 family 0.05 Orthogroups_2024-Update
HORVU5Hr1G105870.1 No alias component *(uL4) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Kfl00456_0100 kfl00456_0100_v1.1 (at3g09630 : 489.0) Ribosomal protein L4/L1 family;... 0.03 Orthogroups_2024-Update
MA_9991417g0010 No alias (at3g09630 : 255.0) Ribosomal protein L4/L1 family;... 0.03 Orthogroups_2024-Update
Pp1s10_102V6 No alias 60s ribosomal protein l4 0.04 Orthogroups_2024-Update
Pp1s40_305V6 No alias 60s ribosomal protein l4 0.04 Orthogroups_2024-Update
Seita.2G055300.1 No alias component *(uL4) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Sobic.001G057300.1 No alias component *(uL4) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Sobic.002G054000.1 No alias component *(uL4) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Solyc09g007250 No alias 60S ribosomal protein L4 (AHRD V3.3 *** RL4_PRUAR) 0.04 Orthogroups_2024-Update
Solyc10g084350 No alias 60S ribosomal L4 (AHRD V3.3 *** A0A0B0NGW3_GOSAR) 0.06 Orthogroups_2024-Update
Solyc10g086010 No alias 60S ribosomal L4 (AHRD V3.3 *** A0A0B0NGW3_GOSAR) 0.04 Orthogroups_2024-Update
Sopen09g002120 No alias Ribosomal protein L4/L1 family 0.06 Orthogroups_2024-Update
Sopen10g033800 No alias Ribosomal protein L4/L1 family 0.06 Orthogroups_2024-Update
Sopen10g035380 No alias Ribosomal protein L4/L1 family 0.05 Orthogroups_2024-Update
evm.model.contig_2049.5 No alias (at3g09630 : 394.0) Ribosomal protein L4/L1 family;... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006275 regulation of DNA replication IEP Predicted GO
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
CC GO:0031390 Ctf18 RFC-like complex IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR025755 Ribos_L4_C_dom 278 348
IPR002136 Ribosomal_L4/L1e 23 263
No external refs found!