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  5. Glyma.03G180000

Glyma.03G180000


Description : FASCICLIN-like arabinogalactan-protein 11


Gene families : OG_42_0000509 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000509_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.03G180000
Cluster HCCA clusters: Cluster_376

Target Alias Description ECC score Gene Family Method Actions
Bradi2g00220 No alias FASCICLIN-like arabinogalactan-protein 11 0.02 Orthogroups_2024-Update
Bradi2g16560 No alias FASCICLIN-like arabinogalactan protein 13 precursor 0.03 Orthogroups_2024-Update
Bradi2g16570 No alias FASCICLIN-like arabinogalactan-protein 11 0.03 Orthogroups_2024-Update
Bradi2g34650 No alias FASCICLIN-like arabinogalactan-protein 11 0.02 Orthogroups_2024-Update
Glyma.03G179900 No alias FASCICLIN-like arabinogalactan-protein 11 0.04 Orthogroups_2024-Update
Glyma.05G162000 No alias FASCICLIN-like arabinogalactan-protein 11 0.03 Orthogroups_2024-Update
Glyma.08G119500 No alias FASCICLIN-like arabinogalactan-protein 12 0.03 Orthogroups_2024-Update
HORVU1Hr1G087570.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU3Hr1G018810.2 No alias Fasciclin-type arabinogalactan protein 0.04 Orthogroups_2024-Update
LOC_Os01g06580 No alias fasciclin domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g48900 No alias fasciclin domain containing protein, expressed 0.02 Orthogroups_2024-Update
Potri.006G129200 No alias FASCICLIN-like arabinogalactan-protein 11 0.05 Orthogroups_2024-Update
Potri.015G129400 No alias FASCICLIN-like arabinogalactan-protein 11 0.03 Orthogroups_2024-Update
Seita.1G139500.1 No alias Fasciclin-type arabinogalactan protein 0.02 Orthogroups_2024-Update
Sobic.002G351000.1 No alias Fasciclin-type arabinogalactan protein 0.02 Orthogroups_2024-Update
Sopen09g002540 No alias Fasciclin domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0004003 ATP-dependent DNA helicase activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
MF GO:0008026 ATP-dependent helicase activity IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
MF GO:0070035 purine NTP-dependent helicase activity IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000782 FAS1_domain 39 173
No external refs found!