Glyma.03G216800

Description : Pectin lyase-like superfamily protein

Gene families : OG_42_0000259 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.03G216800
Cluster	HCCA clusters: Cluster_285

Target	Alias	Description	ECC score	Gene Family Method
A4A49_18383	No alias	putative polygalacturonase	0.04	Orthogroups_2024-Update
LOC_Os09g26800	No alias	polygalacturonase, putative, expressed	0.02	Orthogroups_2024-Update
Potri.006G139500	No alias	Pectin lyase-like superfamily protein	0.03	Orthogroups_2024-Update
Potri.007G105800	No alias	Pectin lyase-like superfamily protein	0.04	Orthogroups_2024-Update
Potri.008G211500	No alias	Pectin lyase-like superfamily protein	0.03	Orthogroups_2024-Update
Potri.010G008600	No alias	Pectin lyase-like superfamily protein	0.03	Orthogroups_2024-Update
Solyc01g094970	No alias	Pectin lyase-like superfamily protein (AHRD V3.3 *** AT3G61490.4)	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004650	polygalacturonase activity	IEA	InterProScan predictions
BP	GO:0005975	carbohydrate metabolic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004857	enzyme inhibitor activity	IEP	Predicted GO
MF	GO:0004866	endopeptidase inhibitor activity	IEP	Predicted GO
BP	GO:0008037	cell recognition	IEP	Predicted GO
BP	GO:0022414	reproductive process	IEP	Predicted GO
MF	GO:0030234	enzyme regulator activity	IEP	Predicted GO
MF	GO:0030414	peptidase inhibitor activity	IEP	Predicted GO
BP	GO:0048544	recognition of pollen	IEP	Predicted GO
MF	GO:0061134	peptidase regulator activity	IEP	Predicted GO
MF	GO:0061135	endopeptidase regulator activity	IEP	Predicted GO
MF	GO:0098772	molecular function regulator	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000743	Glyco_hydro_28	153	434

External Links

No external refs found!