Description : Ribosomal L22e protein family
Gene families : OG_42_0001702 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001702_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.03G235000 | |
Cluster | HCCA clusters: Cluster_158 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
270704 | No alias | Ribosomal L22e protein family | 0.06 | Orthogroups_2024-Update | |
A4A49_12264 | No alias | 60s ribosomal protein l22-2 | 0.05 | Orthogroups_2024-Update | |
At3g05560 | No alias | 60S ribosomal protein L22-2... | 0.05 | Orthogroups_2024-Update | |
Bradi1g62830 | No alias | Ribosomal L22e protein family | 0.02 | Orthogroups_2024-Update | |
Brara.A03699.1 | No alias | component *(eL22) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
Brara.C03109.1 | No alias | component *(eL22) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
Brara.E03358.1 | No alias | component *(eL22) of large ribosomal-subunit (LSU) proteome | 0.09 | Orthogroups_2024-Update | |
Brara.F02844.1 | No alias | component *(eL22) of large ribosomal-subunit (LSU) proteome | 0.05 | Orthogroups_2024-Update | |
Cre07.g357850 | No alias | Ribosomal L22e protein family | 0.06 | Orthogroups_2024-Update | |
Glyma.10G018200 | No alias | Ribosomal L22e protein family | 0.04 | Orthogroups_2024-Update | |
Glyma.20G237000 | No alias | Ribosomal L22e protein family | 0.03 | Orthogroups_2024-Update | |
HORVU2Hr1G019160.1 | No alias | component *(eL22) of large ribosomal-subunit (LSU) proteome | 0.06 | Orthogroups_2024-Update | |
HORVU7Hr1G080630.1 | No alias | component *(eL22) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
Kfl00104_0130 | kfl00104_0130_v1.1 | (at5g27770 : 144.0) Ribosomal L22e protein family;... | 0.03 | Orthogroups_2024-Update | |
Mp4g02920.1 | No alias | component RPL22 of LSU proteome component | 0.04 | Orthogroups_2024-Update | |
PSME_00024504-RA | No alias | (at3g05560 : 145.0) Ribosomal L22e protein family;... | 0.05 | Orthogroups_2024-Update | |
Potri.010G012700 | No alias | Ribosomal L22e protein family | 0.03 | Orthogroups_2024-Update | |
Potri.014G128800 | No alias | Ribosomal L22e protein family | 0.04 | Orthogroups_2024-Update | |
Pp1s283_20V6 | No alias | 60s ribosomal protein | 0.04 | Orthogroups_2024-Update | |
Pp1s457_15V6 | No alias | 60s ribosomal protein | 0.03 | Orthogroups_2024-Update | |
Seita.2G429500.1 | No alias | component *(eL22) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
Seita.9G409100.1 | No alias | component *(eL22) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
Sobic.001G376600.1 | No alias | component *(eL22) of large ribosomal-subunit (LSU) proteome | 0.06 | Orthogroups_2024-Update | |
Sobic.002G414700.1 | No alias | component *(eL22) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
Solyc01g099830 | No alias | 60S ribosomal protein L22-2 (AHRD V3.3 *** W9QTY3_9ROSA) | 0.07 | Orthogroups_2024-Update | |
Solyc09g075150 | No alias | 60S ribosomal protein L22-2 (AHRD V3.3 *** RL222_ARATH) | 0.04 | Orthogroups_2024-Update | |
Solyc09g075160 | No alias | 60S ribosomal protein L22-2 (AHRD V3.3 *** RL222_ARATH) | 0.03 | Orthogroups_2024-Update | |
Sopen01g043340 | No alias | Ribosomal L22e protein family | 0.06 | Orthogroups_2024-Update | |
Sopen09g029970 | No alias | Ribosomal L22e protein family | 0.06 | Orthogroups_2024-Update | |
Sopen09g029980 | No alias | Ribosomal L22e protein family | 0.04 | Orthogroups_2024-Update | |
evm.model.contig_2121.19 | No alias | (at3g05560 : 87.0) Ribosomal L22e protein family;... | 0.04 | Orthogroups_2024-Update | |
evm.model.tig00001206.7 | No alias | (at3g05560 : 112.0) Ribosomal L22e protein family;... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | InterProScan predictions |
CC | GO:0005622 | intracellular | IEA | InterProScan predictions |
CC | GO:0005840 | ribosome | IEA | InterProScan predictions |
BP | GO:0006412 | translation | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003743 | translation initiation factor activity | IEP | Predicted GO |
BP | GO:0006413 | translational initiation | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
MF | GO:0030515 | snoRNA binding | IEP | Predicted GO |
BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
BP | GO:0044085 | cellular component biogenesis | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002671 | Ribosomal_L22e | 14 | 122 |
No external refs found! |