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  5. Glyma.03G259200

Glyma.03G259200


Description : RAB GTPase homolog A3


Gene families : OG_42_0000131 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.03G259200
Cluster HCCA clusters: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
At3g46830 No alias Ras-related protein RABA2c... 0.03 Orthogroups_2024-Update
Brara.B02845.1 No alias A-class RAB GTPase 0.03 Orthogroups_2024-Update
Brara.H00953.1 No alias A-class RAB GTPase 0.03 Orthogroups_2024-Update
Brara.H01978.1 No alias A-class RAB GTPase 0.03 Orthogroups_2024-Update
Brara.K00424.1 No alias A-class RAB GTPase 0.05 Orthogroups_2024-Update
GRMZM2G052509 No alias RAB GTPase homolog A3 0.02 Orthogroups_2024-Update
Glyma.02G176000 No alias RAB GTPase homolog A4D 0.05 Orthogroups_2024-Update
Glyma.08G133800 No alias RAB GTPase homolog A4A 0.03 Orthogroups_2024-Update
Glyma.13G289300 No alias Ras-related small GTP-binding family protein 0.04 Orthogroups_2024-Update
HORVU5Hr1G120210.4 No alias A-class RAB GTPase 0.03 Orthogroups_2024-Update
HORVU7Hr1G089120.1 No alias A-class RAB GTPase 0.03 Orthogroups_2024-Update
LOC_Os03g60870 No alias ras-related protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g44070 No alias ras-related protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g23100 No alias ras-related protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.006G057700 No alias RAB GTPase homolog A4D 0.03 Orthogroups_2024-Update
Potri.010G197200 No alias RAB GTPase homolog A2B 0.03 Orthogroups_2024-Update
Pp1s21_298V6 No alias ras-related protein rab11a 0.03 Orthogroups_2024-Update
Pp1s26_33V6 No alias member ras oncogene family 0.02 Orthogroups_2024-Update
Sobic.010G265400.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
MF GO:0005525 GTP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001806 Small_GTPase 26 186
No external refs found!