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  5. Glyma.03G262200

Glyma.03G262200


Description : AP2/B3-like transcriptional factor family protein


Gene families : OG_42_0000305 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000305_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.03G262200
Cluster HCCA clusters: Cluster_370

Target Alias Description ECC score Gene Family Method Actions
A4A49_20433 No alias b3 domain-containing transcription factor nga3 0.03 Orthogroups_2024-Update
Brara.C02344.1 No alias RAV/NGATHA-type transcription factor 0.03 Orthogroups_2024-Update
Brara.D00076.1 No alias RAV/NGATHA-type transcription factor 0.03 Orthogroups_2024-Update
Brara.F03325.1 No alias RAV/NGATHA-type transcription factor & AP2-RAV-type... 0.04 Orthogroups_2024-Update
Glyma.16G017100 No alias AP2/B3-like transcriptional factor family protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G010190.5 No alias RAV/NGATHA-type transcription factor & AP2-RAV-type... 0.04 Orthogroups_2024-Update
HORVU5Hr1G040620.2 No alias RAV/NGATHA-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os01g04750 No alias B3 DNA binding domain containing protein, expressed 0.03 Orthogroups_2024-Update
PSME_00021294-RA No alias (at1g13260 : 294.0) Encodes an AP2/B3 domain... 0.03 Orthogroups_2024-Update
PSME_00048986-RA No alias (at1g25560 : 246.0) Encodes a member of the RAV... 0.04 Orthogroups_2024-Update
PSME_00057154-RA No alias (at1g13260 : 282.0) Encodes an AP2/B3 domain... 0.02 Orthogroups_2024-Update
Seita.5G280700.1 No alias RAV/NGATHA-type transcription factor & AP2-RAV-type... 0.03 Orthogroups_2024-Update
Sobic.005G041400.2 No alias RAV/NGATHA-type transcription factor 0.03 Orthogroups_2024-Update
Sopen08g004540 No alias B3 DNA binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005666 RNA polymerase III complex IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006383 transcription by RNA polymerase III IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 88 192
No external refs found!