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  5. Glyma.04G028600

Glyma.04G028600


Description : beta-galactosidase 3


Gene families : OG_42_0000109 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000109_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.04G028600
Cluster HCCA clusters: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
A4A49_18578 No alias beta-galactosidase 1 0.03 Orthogroups_2024-Update
Brara.G01379.1 No alias beta-galactosidase *(BGAL8) & EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
GRMZM2G162238 No alias beta-galactosidase 7 0.03 Orthogroups_2024-Update
GRMZM2G178106 No alias beta-galactosidase 3 0.05 Orthogroups_2024-Update
Glyma.11G147900 No alias beta-galactosidase 8 0.05 Orthogroups_2024-Update
HORVU5Hr1G045800.5 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G146500.1 No alias beta-galactosidase *(MUM2) & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
evm.model.tig00020510.44 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR031330 Gly_Hdrlase_35_cat 36 339
No external refs found!