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  5. Glyma.04G043600

Glyma.04G043600


Description : Cyclin A3;1


Gene families : OG_42_0000120 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.04G043600
Cluster HCCA clusters: Cluster_336

Target Alias Description ECC score Gene Family Method Actions
At1g44110 No alias CYCA1 [Source:UniProtKB/TrEMBL;Acc:A0A178W0H5] 0.03 Orthogroups_2024-Update
At3g11520 No alias Cyclin-B1-3 [Source:UniProtKB/Swiss-Prot;Acc:Q39069] 0.03 Orthogroups_2024-Update
At4g35620 No alias Cyclin-B2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q39070] 0.04 Orthogroups_2024-Update
Brara.B00199.1 No alias regulatory protein *(CYCB) of cell cycle 0.07 Orthogroups_2024-Update
Brara.C00237.1 No alias regulatory protein *(CYCB) of cell cycle 0.04 Orthogroups_2024-Update
Brara.E01867.1 No alias regulatory protein *(TAM) involved in metaphase to... 0.04 Orthogroups_2024-Update
Brara.G00692.1 No alias regulatory protein *(CYCB) of cell cycle 0.04 Orthogroups_2024-Update
Brara.H00423.1 No alias regulatory protein *(CYCA) of cell cycle 0.06 Orthogroups_2024-Update
Brara.H02508.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.K01353.1 No alias regulatory protein *(CYCB) of cell cycle 0.04 Orthogroups_2024-Update
Cre03.g207900 No alias Cyclin A2;4 0.03 Orthogroups_2024-Update
Cre08.g370401 No alias CYCLIN B2;4 0.02 Orthogroups_2024-Update
Cre12.g511400 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Glyma.04G043500 No alias Cyclin A3;1 0.03 Orthogroups_2024-Update
Glyma.04G246600 No alias Cyclin A1;1 0.05 Orthogroups_2024-Update
Glyma.06G044000 No alias Cyclin A3;1 0.03 Orthogroups_2024-Update
Glyma.06G072900 No alias mitotic-like cyclin 3B from Arabidopsis 0.04 Orthogroups_2024-Update
Glyma.08G234900 No alias cyclin b3;1 0.03 Orthogroups_2024-Update
Glyma.11G084500 No alias Cyclin B2;3 0.06 Orthogroups_2024-Update
HORVU5Hr1G018820.2 No alias regulatory protein *(CYCA) of cell cycle 0.03 Orthogroups_2024-Update
Kfl00112_0070 kfl00112_0070_v1.... (at1g80370 : 326.0) Cyclin A2;4 (CYCA2;4); CONTAINS... 0.03 Orthogroups_2024-Update
LOC_Os01g59120 No alias cyclin, putative, expressed 0.05 Orthogroups_2024-Update
LOC_Os06g51110 No alias cyclin, putative, expressed 0.02 Orthogroups_2024-Update
MA_28323g0010 No alias (at5g11300 : 355.0) mitotic-like cyclin, core cell cycle... 0.06 Orthogroups_2024-Update
MA_6619g0010 No alias (at1g44110 : 409.0) Cyclin A1;1 (CYCA1;1); CONTAINS... 0.06 Orthogroups_2024-Update
MA_88982g0010 No alias (at5g11300 : 380.0) mitotic-like cyclin, core cell cycle... 0.04 Orthogroups_2024-Update
Mp2g25500.1 No alias cyclin (CYCA) 0.04 Orthogroups_2024-Update
Mp5g10030.1 No alias cyclin (CYCB) 0.02 Orthogroups_2024-Update
PSME_00006666-RA No alias (p30278|ccnb2_medsa : 268.0) G2/mitotic-specific... 0.02 Orthogroups_2024-Update
Potri.002G010000 No alias CYCLIN B2;4 0.05 Orthogroups_2024-Update
Seita.4G286400.1 No alias regulatory protein *(CYCB) of cell cycle 0.03 Orthogroups_2024-Update
Sobic.001G169800.2 No alias regulatory protein *(CYCA) of cell cycle 0.04 Orthogroups_2024-Update
Sobic.006G179200.1 No alias regulatory protein *(CYCB) of cell cycle 0.04 Orthogroups_2024-Update
Solyc01g009040 No alias cyclinB1_4 0.04 Orthogroups_2024-Update
Solyc03g032190 No alias cyclinB2_7 0.03 Orthogroups_2024-Update
Solyc03g120440 No alias cyclin A2_1 0.06 Orthogroups_2024-Update
Solyc04g078310 No alias cyclin A3_1 0.08 Orthogroups_2024-Update
Solyc04g082430 No alias cyclinB2_4 0.03 Orthogroups_2024-Update
Solyc06g065680 No alias cyclin A2 0.03 Orthogroups_2024-Update
Solyc07g066660 No alias cyclinB3_1 0.05 Orthogroups_2024-Update
Solyc10g078330 No alias B-type cyclin 0.04 Orthogroups_2024-Update
Solyc10g080950 No alias cyclinB1_2 0.04 Orthogroups_2024-Update
Solyc11g005090 No alias cyclin A1 0.05 Orthogroups_2024-Update
Solyc12g088470 No alias cyclin A3_4 0.08 Orthogroups_2024-Update
Solyc12g088500 No alias cyclin A3_5 0.08 Orthogroups_2024-Update
Solyc12g088530 No alias cyclin A3.1 0.04 Orthogroups_2024-Update
Sopen01g004530 No alias Cyclin, N-terminal domain 0.05 Orthogroups_2024-Update
Sopen03g006030 No alias Cyclin, N-terminal domain 0.03 Orthogroups_2024-Update
Sopen04g031900 No alias Cyclin, N-terminal domain 0.05 Orthogroups_2024-Update
Sopen04g036020 No alias Cyclin, N-terminal domain 0.05 Orthogroups_2024-Update
Sopen06g024200 No alias Cyclin, N-terminal domain 0.09 Orthogroups_2024-Update
Sopen10g019800 No alias Cyclin, N-terminal domain 0.03 Orthogroups_2024-Update
Sopen10g031460 No alias Cyclin, N-terminal domain 0.04 Orthogroups_2024-Update
Sopen12g030490 No alias Cyclin, N-terminal domain 0.04 Orthogroups_2024-Update
evm.model.contig_554.3 No alias (q40671|ccnb2_orysa : 240.0) G2/mitotic-specific... 0.02 Orthogroups_2024-Update
evm.model.tig00000076.67 No alias (at1g44110 : 156.0) Cyclin A1;1 (CYCA1;1); CONTAINS... 0.02 Orthogroups_2024-Update
evm.model.tig00000769.38 No alias (at1g76310 : 252.0) core cell cycle genes; CYCLIN B2;4... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Predicted GO
BP GO:0019310 inositol catabolic process IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0044275 cellular carbohydrate catabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
MF GO:0050113 inositol oxygenase activity IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 241 363
IPR006671 Cyclin_N 112 238
No external refs found!