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  5. Glyma.04G044800

Glyma.04G044800


Description : LOB domain-containing protein 39


Gene families : OG_42_0000544 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000544_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.04G044800
Cluster HCCA clusters: Cluster_372

Target Alias Description ECC score Gene Family Method Actions
Brara.A00131.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Brara.A03882.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Seita.5G271800.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
MF GO:0000287 magnesium ion binding IEP Predicted GO
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0034227 tRNA thio-modification IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 19 118
No external refs found!