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  5. Glyma.04G050300

Glyma.04G050300


Description : CCCH-type zinc finger family protein


Gene families : OG_42_0000745 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000745_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.04G050300
Cluster HCCA clusters: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
A4A49_35503 No alias zinc finger ccch domain-containing protein 20 0.04 Orthogroups_2024-Update
Glyma.07G126800 No alias CCCH-type zinc finger family protein 0.03 Orthogroups_2024-Update
MA_88541g0010 No alias (at2g19810 : 241.0) CCCH-type zinc finger family... 0.03 Orthogroups_2024-Update
PSME_00016861-RA No alias (at2g19810 : 252.0) CCCH-type zinc finger family... 0.03 Orthogroups_2024-Update
PSME_00023765-RA No alias (at2g19810 : 226.0) CCCH-type zinc finger family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0009975 cyclase activity IEP Predicted GO
MF GO:0009976 tocopherol cyclase activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 82 101
No external refs found!