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  5. Glyma.04G052600

Glyma.04G052600


Description : Putative lysine decarboxylase family protein


Gene families : OG_42_0000308 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000308_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.04G052600
Cluster HCCA clusters: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
402882 No alias Putative lysine decarboxylase family protein 0.03 Orthogroups_2024-Update
A4A49_28491 No alias cytokinin riboside 5'-monophosphate phosphoribohydrolase log3 0.03 Orthogroups_2024-Update
At2g28305 No alias Cytokinin riboside 5'-monophosphate phosphoribohydrolase... 0.05 Orthogroups_2024-Update
Brara.B00088.1 No alias cytokinin phosphoribohydrolase *(LOG) 0.05 Orthogroups_2024-Update
Brara.B00205.1 No alias cytokinin phosphoribohydrolase *(LOG) 0.03 Orthogroups_2024-Update
Cre07.g340900 No alias Putative lysine decarboxylase family protein 0.02 Orthogroups_2024-Update
GRMZM5G879665 No alias lysine decarboxylase family protein 0.03 Orthogroups_2024-Update
Glyma.17G257200 No alias Putative lysine decarboxylase family protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G124750.1 No alias cytokinin phosphoribohydrolase *(LOG) 0.07 Orthogroups_2024-Update
LOC_Os01g51210 No alias uncharacterized protein PA4923, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os03g64070 No alias uncharacterized protein PA4923, putative, expressed 0.03 Orthogroups_2024-Update
Potri.006G127400 No alias lysine decarboxylase family protein 0.03 Orthogroups_2024-Update
Seita.5G208900.1 No alias cytokinin phosphoribohydrolase *(LOG) 0.02 Orthogroups_2024-Update
Solyc04g081290 No alias Cytokinin riboside 5'-monophosphate phosphoribohydrolase... 0.05 Orthogroups_2024-Update
Sopen09g002670 No alias Possible lysine decarboxylase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR031100 LOG_fam 55 185
No external refs found!