Glyma.04G064100

Description : KNOTTED1-like homeobox gene 3

Gene families : OG_42_0000234 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000234_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.04G064100
Cluster	HCCA clusters: Cluster_340

Target	Alias	Description	ECC score	Gene Family Method
A4A49_11478	No alias	homeobox protein knotted-1-like 6	0.03	Orthogroups_2024-Update
At1g70510	No alias	KNOTTED-like from Arabidopsis thaliana 2...	0.03	Orthogroups_2024-Update
At5g11060	No alias	KNAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UC59]	0.03	Orthogroups_2024-Update
Bradi1g76970	No alias	KNOTTED-like homeobox of Arabidopsis thaliana 7	0.03	Orthogroups_2024-Update
Brara.B03654.1	No alias	KNOX-type transcription factor	0.03	Orthogroups_2024-Update
Brara.F02723.1	No alias	KNOX-type transcription factor	0.05	Orthogroups_2024-Update
Brara.I01459.1	No alias	KNOX-type transcription factor	0.03	Orthogroups_2024-Update
Brara.K00379.1	No alias	KNOX-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G017087	No alias	KNOTTED-like from Arabidopsis thaliana	0.03	Orthogroups_2024-Update
Glyma.06G065200	No alias	KNOTTED1-like homeobox gene 3	0.06	Orthogroups_2024-Update
Glyma.09G095700	No alias	KNOTTED1-like homeobox gene 3	0.04	Orthogroups_2024-Update
Glyma.18G083100	No alias	KNOTTED1-like homeobox gene 5	0.03	Orthogroups_2024-Update
Glyma.19G228300	No alias	KNOTTED1-like homeobox gene 6	0.04	Orthogroups_2024-Update
LOC_Os02g08544	No alias	homeobox protein knotted-1, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os03g03164	No alias	homeobox protein knotted-1, putative, expressed	0.03	Orthogroups_2024-Update
PSME_00033425-RA	No alias	(o04135\|knap2_maldo : 176.0) Homeobox protein...	0.03	Orthogroups_2024-Update
PSME_00035381-RA	No alias	(p46609\|osh1_orysa : 118.0) Homeobox protein OSH1 -...	0.02	Orthogroups_2024-Update
Potri.018G114100	No alias	KNOTTED1-like homeobox gene 3	0.03	Orthogroups_2024-Update
Seita.4G199200.1	No alias	KNOX-type transcription factor	0.03	Orthogroups_2024-Update
Seita.9G074700.1	No alias	KNOX-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G144200.1	No alias	KNOX-type transcription factor	0.02	Orthogroups_2024-Update
Solyc05g005090	No alias	Knotted-1 homeobox protein (AHRD V3.3 *** R9R650_9FABA)	0.04	Orthogroups_2024-Update
Sopen05g001110	No alias	KNOX2 domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Predicted GO
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predicted GO
MF	GO:0004673	protein histidine kinase activity	IEP	Predicted GO
MF	GO:0005515	protein binding	IEP	Predicted GO
CC	GO:0005672	transcription factor TFIIA complex	IEP	Predicted GO
BP	GO:0006367	transcription initiation from RNA polymerase II promoter	IEP	Predicted GO
MF	GO:0010333	terpene synthase activity	IEP	Predicted GO
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Predicted GO
MF	GO:0043565	sequence-specific DNA binding	IEP	Predicted GO
CC	GO:0044798	nuclear transcription factor complex	IEP	Predicted GO
CC	GO:0090575	RNA polymerase II transcription factor complex	IEP	Predicted GO
MF	GO:0140110	transcription regulator activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR008422	Homeobox_KN_domain	353	392
IPR005540	KNOX1	150	191
IPR005539	ELK_dom	313	334
IPR005541	KNOX2	205	255

External Links

No external refs found!

Glyma.04G064100

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation