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  5. Glyma.04G065000

Glyma.04G065000


Description : TOPLESS-related 1


Gene families : OG_42_0000373 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000373_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.04G065000
Cluster HCCA clusters: Cluster_452

Target Alias Description ECC score Gene Family Method Actions
Brara.C00365.1 No alias component *(SPT4) of SPT4/5 transcription elongation... 0.03 Orthogroups_2024-Update
HORVU3Hr1G035170.2 No alias transcriptional co-repressor *(TPL/TPR) & auxin... 0.04 Orthogroups_2024-Update
PSME_00009165-RA No alias (at1g15750 : 711.0) Encodes a protein with several WD40... 0.03 Orthogroups_2024-Update
PSME_00009329-RA No alias (at1g15750 : 582.0) Encodes a protein with several WD40... 0.03 Orthogroups_2024-Update
PSME_00010135-RA No alias (at1g15750 : 426.0) Encodes a protein with several WD40... 0.02 Orthogroups_2024-Update
Potri.018G023800 No alias TOPLESS-related 1 0.03 Orthogroups_2024-Update
Seita.9G466100.1 No alias auxin signalling transcriptional co-repressor *(TPL/TPR)... 0.03 Orthogroups_2024-Update
Sopen05g014120 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009086 methionine biosynthetic process IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 856 891
IPR001680 WD40_repeat 408 441
No external refs found!