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  5. Glyma.04G102900

Glyma.04G102900


Description : pumilio 7


Gene families : OG_42_0001160 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001160_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.04G102900
Cluster HCCA clusters: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
A4A49_25869 No alias pumilio-like 12 0.03 Orthogroups_2024-Update
At1g35730 No alias pumilio 9 [Source:TAIR;Acc:AT1G35730] 0.02 Orthogroups_2024-Update
Glyma.06G104100 No alias pumilio 7 0.08 Orthogroups_2024-Update
Glyma.13G088600 No alias pumilio 7 0.03 Orthogroups_2024-Update
HORVU5Hr1G038840.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os03g09150 No alias pumilio-family RNA binding repeat domain containing... 0.02 Orthogroups_2024-Update
LOC_Os12g31000 No alias pumilio-family RNA binding repeat domain containing... 0.03 Orthogroups_2024-Update
Pp1s14_277V6 No alias MCD7.1; pumilio-family RNA-binding protein, putative... 0.02 Orthogroups_2024-Update
Sobic.008G100300.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0004097 catechol oxidase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 487 517
IPR001313 Pumilio_RNA-bd_rpt 557 581
IPR001313 Pumilio_RNA-bd_rpt 528 547
IPR001313 Pumilio_RNA-bd_rpt 416 443
IPR001313 Pumilio_RNA-bd_rpt 449 482
IPR001313 Pumilio_RNA-bd_rpt 373 405
No external refs found!