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  5. Glyma.04G113400

Glyma.04G113400


Description : FAD-binding Berberine family protein


Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.04G113400
Cluster HCCA clusters: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
A4A49_16806 No alias flavin-dependent oxidoreductase fox2 0.03 Orthogroups_2024-Update
AC203909.3_FG003 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
At1g26400 No alias Berberine bridge enzyme-like 5... 0.03 Orthogroups_2024-Update
At1g26410 No alias Berberine bridge enzyme-like 6... 0.03 Orthogroups_2024-Update
Bradi1g38250 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Bradi4g18970 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Brara.A01126.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Brara.F03744.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Brara.I01843.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.04 Orthogroups_2024-Update
Brara.I03596.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.02 Orthogroups_2024-Update
Glyma.06G321600 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.08G059000 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Glyma.08G080100 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.08G080200 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.15G133200 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.20G213100 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
LOC_Os06g35590 No alias reticuline oxidase-like protein precursor, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00002246-RA No alias (at5g44400 : 385.0) FAD-binding Berberine family... 0.04 Orthogroups_2024-Update
PSME_00002247-RA No alias (at5g44400 : 388.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
Seita.4G178000.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Sobic.010G162700.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Sobic.010G162900.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.04 Orthogroups_2024-Update
Solyc02g070200 No alias FAD-binding Berberine family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen03g002700 No alias Berberine and berberine like 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR012951 BBE 464 521
IPR006094 Oxid_FAD_bind_N 75 211
No external refs found!