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  5. Glyma.04G117600

Glyma.04G117600


Description : hAT transposon superfamily


Gene families : OG_42_0000049 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000049_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.04G117600
Cluster HCCA clusters: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Glyma.07G169600 No alias hAT dimerisation domain-containing protein / transposase-related 0.03 Orthogroups_2024-Update
Glyma.09G104100 No alias hAT transposon superfamily 0.04 Orthogroups_2024-Update
LOC_Os07g15420 No alias transposon protein, putative, Ac/Ds sub-class, expressed 0.02 Orthogroups_2024-Update
MA_10332809g0010 No alias (at1g79740 : 151.0) hAT transposon superfamily;... 0.02 Orthogroups_2024-Update
MA_1168583g0010 No alias (at5g33406 : 110.0) hAT dimerisation domain-containing... 0.02 Orthogroups_2024-Update
MA_169843g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_171023g0020 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00014139-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00020468-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00038048-RA No alias (at1g79740 : 164.0) hAT transposon superfamily;... 0.03 Orthogroups_2024-Update
PSME_00045506-RA No alias (at5g33406 : 92.0) hAT dimerisation domain-containing... 0.03 Orthogroups_2024-Update
PSME_00050173-RA No alias (at3g17450 : 133.0) hAT dimerisation domain-containing... 0.03 Orthogroups_2024-Update
PSME_00055607-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Solyc12g056870 No alias No description available 0.04 Orthogroups_2024-Update
Sopen06g009570 No alias Protein of unknown function (DUF 659) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0016255 attachment of GPI anchor to protein IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
InterPro domains Description Start Stop
IPR008906 HATC_C_dom 684 759
IPR007021 DUF659 323 471
IPR003656 Znf_BED 135 162
No external refs found!