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  5. Glyma.04G145400

Glyma.04G145400


Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein


Gene families : OG_42_0000879 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000879_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.04G145400
Cluster HCCA clusters: Cluster_385

Target Alias Description ECC score Gene Family Method Actions
104808 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
At2g40700 No alias P-loop containing nucleoside triphosphate hydrolases... 0.06 Orthogroups_2024-Update
At3g18600 No alias DEAD-box ATP-dependent RNA helicase 51... 0.05 Orthogroups_2024-Update
At5g54910 No alias DEAD-box ATP-dependent RNA helicase 32... 0.08 Orthogroups_2024-Update
Bradi4g41160 No alias P-loop containing nucleoside triphosphate hydrolases... 0.06 Orthogroups_2024-Update
Brara.E02336.1 No alias regulatory RNA helicase *(RH27/RH51) of miRNA biogenesis pathway 0.1 Orthogroups_2024-Update
Brara.F02458.1 No alias regulatory RNA helicase *(RH27/RH51) of miRNA biogenesis pathway 0.06 Orthogroups_2024-Update
Brara.J00951.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Cre03.g156150 No alias DEA(D/H)-box RNA helicase family protein 0.06 Orthogroups_2024-Update
Cre07.g314900 No alias P-loop containing nucleoside triphosphate hydrolases... 0.08 Orthogroups_2024-Update
GRMZM5G897976 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Orthogroups_2024-Update
HORVU1Hr1G004510.5 No alias Unknown function 0.05 Orthogroups_2024-Update
Kfl00121_0050 kfl00121_0050_v1.1 (at5g54910 : 607.0) DEA(D/H)-box RNA helicase family... 0.03 Orthogroups_2024-Update
Kfl00630_0030 kfl00630_0030_v1.... (at3g18600 : 568.0) P-loop containing nucleoside... 0.09 Orthogroups_2024-Update
Mp8g10290.1 No alias DEAD-box ATP-dependent RNA helicase 32 OS=Arabidopsis... 0.02 Orthogroups_2024-Update
Potri.001G250700 No alias P-loop containing nucleoside triphosphate hydrolases... 0.08 Orthogroups_2024-Update
Potri.001G423300 No alias DEA(D/H)-box RNA helicase family protein 0.05 Orthogroups_2024-Update
Potri.009G045300 No alias P-loop containing nucleoside triphosphate hydrolases... 0.07 Orthogroups_2024-Update
Pp1s59_317V6 No alias rna helicase 0.07 Orthogroups_2024-Update
Seita.2G332500.1 No alias Unknown function 0.12 Orthogroups_2024-Update
Sobic.001G051500.1 No alias regulatory RNA helicase *(RH27/RH51) of miRNA biogenesis pathway 0.07 Orthogroups_2024-Update
Sobic.002G318800.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Solyc03g114370 No alias RNA helicase DEAD13 0.04 Orthogroups_2024-Update
Sopen03g033470 No alias DEAD/DEAH box helicase 0.07 Orthogroups_2024-Update
Sopen07g032720 No alias DEAD/DEAH box helicase 0.04 Orthogroups_2024-Update
evm.model.tig00000441.11 No alias (at3g18600 : 300.0) P-loop containing nucleoside... 0.04 Orthogroups_2024-Update
evm.model.tig00000441.12 No alias (at5g65900 : 171.0) DEA(D/H)-box RNA helicase family... 0.05 Orthogroups_2024-Update
evm.model.tig00000615.43 No alias (at2g40700 : 189.0) P-loop containing nucleoside... 0.02 Orthogroups_2024-Update
evm.model.tig00020604.24 No alias (at5g54910 : 437.0) DEA(D/H)-box RNA helicase family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0004003 ATP-dependent DNA helicase activity IEP Predicted GO
MF GO:0004055 argininosuccinate synthase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006525 arginine metabolic process IEP Predicted GO
BP GO:0006526 arginine biosynthetic process IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
MF GO:0008026 ATP-dependent helicase activity IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
MF GO:0043138 3'-5' DNA helicase activity IEP Predicted GO
MF GO:0043140 ATP-dependent 3'-5' DNA helicase activity IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
MF GO:0070035 purine NTP-dependent helicase activity IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0098599 palmitoyl hydrolase activity IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 101 272
IPR025313 DUF4217 459 519
IPR001650 Helicase_C 313 417
No external refs found!