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  5. Glyma.04G157500

Glyma.04G157500


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0000512 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000512_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.04G157500
Cluster HCCA clusters: Cluster_539

Target Alias Description ECC score Gene Family Method Actions
A4A49_10908 No alias polygalacturonase 0.05 Orthogroups_2024-Update
A4A49_28810 No alias polygalacturonase 0.05 Orthogroups_2024-Update
At1g17150 No alias Pectin lyase-like superfamily protein... 0.03 Orthogroups_2024-Update
At2g26620 No alias Pectin lyase-like superfamily protein... 0.03 Orthogroups_2024-Update
At4g13760 No alias Pectin lyase-like superfamily protein... 0.04 Orthogroups_2024-Update
Glyma.04G157600 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
LOC_Os06g40890 No alias polygalacturonase, putative, expressed 0.03 Orthogroups_2024-Update
Potri.002G202100 No alias polygalacturonase 4 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 50 378
No external refs found!