Glyma.04G157700

Description : Pectin lyase-like superfamily protein

Gene families : OG_42_0000512 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000512_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.04G157700
Cluster	HCCA clusters: Cluster_539

Target	Alias	Description	ECC score	Gene Family Method
A4A49_10908	No alias	polygalacturonase	0.04	Orthogroups_2024-Update
A4A49_28810	No alias	polygalacturonase	0.05	Orthogroups_2024-Update
At1g17150	No alias	Pectin lyase-like superfamily protein...	0.03	Orthogroups_2024-Update
At2g26620	No alias	Pectin lyase-like superfamily protein...	0.03	Orthogroups_2024-Update
At4g13760	No alias	Pectin lyase-like superfamily protein...	0.03	Orthogroups_2024-Update
Bradi1g40990	No alias	Pectin lyase-like superfamily protein	0.02	Orthogroups_2024-Update
GRMZM2G394259	No alias	glycoside hydrolase family 28 protein /...	0.02	Orthogroups_2024-Update
Glyma.04G157600	No alias	Pectin lyase-like superfamily protein	0.05	Orthogroups_2024-Update
LOC_Os06g40890	No alias	polygalacturonase, putative, expressed	0.03	Orthogroups_2024-Update
Potri.002G202100	No alias	polygalacturonase 4	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004650	polygalacturonase activity	IEA	InterProScan predictions
BP	GO:0005975	carbohydrate metabolic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006835	dicarboxylic acid transport	IEP	Predicted GO
BP	GO:0015711	organic anion transport	IEP	Predicted GO
BP	GO:0015740	C4-dicarboxylate transport	IEP	Predicted GO
BP	GO:0015743	malate transport	IEP	Predicted GO
BP	GO:0015849	organic acid transport	IEP	Predicted GO
BP	GO:0046942	carboxylic acid transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000743	Glyco_hydro_28	50	378

External Links

No external refs found!