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  5. Glyma.04G158200

Glyma.04G158200


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.04G158200
Cluster HCCA clusters: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
105197 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
134581 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
399 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
82024 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
82058 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
98472 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
A4A49_21718 No alias pentatricopeptide repeat-containing protein 0.02 Orthogroups_2024-Update
A4A49_26813 No alias putative pentatricopeptide repeat-containing protein,... 0.03 Orthogroups_2024-Update
A4A49_38131 No alias pentatricopeptide repeat-containing protein 0.03 Orthogroups_2024-Update
At5g40410 No alias Pentatricopeptide repeat-containing protein At5g40410,... 0.03 Orthogroups_2024-Update
Bradi3g57730 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.01G180600 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
HORVU3Hr1G073540.14 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os02g40750 No alias pentatricopeptide domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
Solyc03g096610 No alias Pentatricopeptide repeat (PPR) superfamily protein (AHRD... 0.03 Orthogroups_2024-Update
Sopen06g033290 No alias PPR repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006353 DNA-templated transcription, termination IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0009143 nucleoside triphosphate catabolic process IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
CC GO:0030008 TRAPP complex IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 60 106
IPR002885 Pentatricopeptide_repeat 204 230
IPR002885 Pentatricopeptide_repeat 136 161
No external refs found!