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  5. Glyma.04G158400

Glyma.04G158400


Description : transducin family protein / WD-40 repeat family protein


Gene families : OG_42_0004602 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004602_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.04G158400
Cluster HCCA clusters: Cluster_299

Target Alias Description ECC score Gene Family Method Actions
At3g42660 No alias Transducin family protein / WD-40 repeat family protein... 0.05 Orthogroups_2024-Update
Cre16.g652950 No alias transducin family protein / WD-40 repeat family protein 0.02 Orthogroups_2024-Update
Kfl00066_0340 kfl00066_0340_v1.1 (at3g42660 : 451.0) transducin family protein / WD-40... 0.02 Orthogroups_2024-Update
MA_10431892g0020 No alias (at3g42660 : 692.0) transducin family protein / WD-40... 0.05 Orthogroups_2024-Update
PSME_00044301-RA No alias (at3g42660 : 276.0) transducin family protein / WD-40... 0.03 Orthogroups_2024-Update
Seita.7G065800.1 No alias regulatory protein ELP1 of PRC1 histone... 0.06 Orthogroups_2024-Update
Sobic.010G147700.1 No alias regulatory protein ELP1 of PRC1 histone... 0.06 Orthogroups_2024-Update
Solyc03g114690 No alias WD-repeat protein, putative (AHRD V3.3 *** B9RVD7_RICCO) 0.04 Orthogroups_2024-Update
Sopen03g033760 No alias WD domain, G-beta repeat 0.06 Orthogroups_2024-Update
evm.model.tig00020780.19 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0003896 DNA primase activity IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006275 regulation of DNA replication IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 56 89
IPR001680 WD40_repeat 140 173
IPR001680 WD40_repeat 236 266
IPR022100 Mcl1_mid 423 705
No external refs found!