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  5. Glyma.04G161400

Glyma.04G161400


Description : TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5


Gene families : OG_42_0000203 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.04G161400
Cluster HCCA clusters: Cluster_335

Target Alias Description ECC score Gene Family Method Actions
Brara.B01816.1 No alias TCP-type transcription factor 0.02 Orthogroups_2024-Update
Brara.B03742.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Brara.K00447.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.08G247300 No alias plastid transcription factor 1 0.03 Orthogroups_2024-Update
Glyma.12G208800 No alias TCP family transcription factor 4 0.04 Orthogroups_2024-Update
Glyma.19G044400 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
HORVU2Hr1G060120.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Mp1g19590.1 No alias transcription factor (TCP) 0.02 Orthogroups_2024-Update
Potri.012G059900 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
Potri.015G050500 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
Potri.T152500 No alias Function unknown 0.03 Orthogroups_2024-Update
Seita.5G327600.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G299700.1 No alias TCP-type transcription factor 0.05 Orthogroups_2024-Update
Solyc07g062680 No alias lanceolate 0.03 Orthogroups_2024-Update
Sopen03g038620 No alias TCP family transcription factor 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000814 ESCRT II complex IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004529 exodeoxyribonuclease activity IEP Predicted GO
MF GO:0004536 deoxyribonuclease activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008297 single-stranded DNA exodeoxyribonuclease activity IEP Predicted GO
MF GO:0008409 5'-3' exonuclease activity IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0035312 5'-3' exodeoxyribonuclease activity IEP Predicted GO
CC GO:0036452 ESCRT complex IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044440 endosomal part IEP Predicted GO
MF GO:0045145 single-stranded DNA 5'-3' exodeoxyribonuclease activity IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0071985 multivesicular body sorting pathway IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 53 171
No external refs found!