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  5. Glyma.04G163700

Glyma.04G163700


Description : hAT transposon superfamily


Gene families : OG_42_0000049 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000049_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.04G163700
Cluster HCCA clusters: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
At3g13030 No alias AT3G13030 protein [Source:UniProtKB/TrEMBL;Acc:Q9LDS0] 0.04 Orthogroups_2024-Update
Glyma.09G104100 No alias hAT transposon superfamily 0.04 Orthogroups_2024-Update
Glyma.12G105500 No alias hAT dimerisation domain-containing protein / transposase-related 0.05 Orthogroups_2024-Update
Glyma.13G192700 No alias hAT transposon superfamily 0.03 Orthogroups_2024-Update
Glyma.13G192800 No alias hAT dimerisation domain-containing protein / transposase-related 0.06 Orthogroups_2024-Update
Glyma.14G162700 No alias hAT transposon superfamily 0.04 Orthogroups_2024-Update
Glyma.15G205800 No alias hAT transposon superfamily 0.03 Orthogroups_2024-Update
Glyma.20G064800 No alias hAT transposon superfamily 0.05 Orthogroups_2024-Update
LOC_Os09g32380 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
PSME_00002788-RA No alias (at4g05160 : 161.0) Encodes a peroxisomal protein... 0.03 Orthogroups_2024-Update
Solyc12g076330 No alias No description available 0.03 Orthogroups_2024-Update
Sopen10g007400 No alias Protein of unknown function (DUF 659) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR008906 HATC_C_dom 581 654
IPR007021 DUF659 218 366
No external refs found!